Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 RNU6-525P-201ENST00000363685 104 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 RNU6-522P-201ENST00000364497 107 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 RNA5SP366-201ENST00000365454 123 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 RNU6-831P-201ENST00000384548 107 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 MIR670-201ENST00000390142 98 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 RPL7AP73-201ENST00000413490 353 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 RPL30P2-201ENST00000414021 291 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 RN7SL691P-201ENST00000494487 301 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 AC146944.2-203ENST00000502493 354 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 HMGN1P13-201ENST00000505795 138 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 FAM206BP-201ENST00000510179 541 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 AC139495.1-202ENST00000513164 354 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 Y_RNA.665-201ENST00000516177 98 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 RNU6-1038P-201ENST00000516516 104 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 RPL7P20-201ENST00000520308 745 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 AL137161.1-201ENST00000532231 390 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 AC093027.1-201ENST00000546698 429 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 ANP32BP3-201ENST00000559213 706 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 AL355375.2-201ENST00000574825 175 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 AC008521.1-201ENST00000587471 187 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 AC174048.1-201ENST00000603389 144 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 AC104662.1-201ENST00000604448 511 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 AC021646.1-201ENST00000605469 484 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 FAM27D1-201ENST00000612308 341 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 AL390240.1-201ENST00000612950 384 ntBASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
AMBRA1Q9C0C7 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 RNU6-882P-201ENST00000391025 103 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 AL451054.2-201ENST00000420896 202 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 CALM2P2-201ENST00000428512 440 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 HMGB1P18-201ENST00000438801 619 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 HSFY6P-201ENST00000445573 403 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 PPP1R2P5-201ENST00000457256 603 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 VN1R105P-201ENST00000486595 910 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 AF213884.1-201ENST00000488102 463 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 AC091167.1-201ENST00000492017 396 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 AC117522.3-201ENST00000507974 584 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 RBBP4P6-201ENST00000508098 202 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 RNU6-277P-201ENST00000516272 106 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 RNA5SP49-201ENST00000516450 115 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 RNU6-1153P-201ENST00000516760 105 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 AC023632.4-201ENST00000517783 191 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 SCOCP1-201ENST00000554676 349 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 AL121576.1-201ENST00000556055 276 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 AC026464.5-201ENST00000562497 722 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 RPL23AP87-202ENST00000573039 466 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 AC006116.10-201ENST00000591836 581 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 AC005498.1-201ENST00000592125 465 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 AL022099.1-201ENST00000604551 712 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 HMGN2P28-201ENST00000606102 262 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 AL050343.2-201ENST00000607338 280 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 AC104237.2-201ENST00000612456 443 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 AC114781.5-201ENST00000615297 108 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms