Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
KRTAP3-1Q9BYR8 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
KRTAP3-1Q9BYR8 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
KRTAP3-1Q9BYR8 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
KRTAP3-1Q9BYR8 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
KRTAP3-1Q9BYR8 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
KRTAP3-1Q9BYR8 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
KRTAP3-1Q9BYR8 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC3.07□□□□□ -1.92
KRTAP3-1Q9BYR8 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
KRTAP3-1Q9BYR8 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 RNU1-108P-201ENST00000362556 161 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 Y_RNA.209-201ENST00000364156 111 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 RNU6-728P-201ENST00000365375 104 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 AC092634.1-201ENST00000366505 199 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 RNU6-1181P-201ENST00000384191 106 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 RNU6-768P-201ENST00000384683 107 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 SNORA7A-201ENST00000384765 139 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 SNORA75.5-201ENST00000391291 81 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 RN7SKP117-201ENST00000410175 264 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 RNA5SP89-201ENST00000410300 108 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 MTND6P12-201ENST00000428247 522 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 BX276092.6-201ENST00000430476 250 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 AL135790.2-201ENST00000437701 267 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 FRG2FP-204ENST00000453982 852 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 RPL12P39-201ENST00000455456 496 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 BX276092.8-201ENST00000455722 250 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 snoU13.4-201ENST00000458916 104 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 AC146507.2-201ENST00000460608 476 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 RN7SL836P-201ENST00000476140 296 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 RPSAP50-201ENST00000481955 852 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 RPL12P30-201ENST00000488389 499 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 RN7SL350P-201ENST00000492591 299 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 KHDC1P1-201ENST00000511053 508 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 SCARNA8-201ENST00000515924 131 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 RN7SKP288-201ENST00000516227 268 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 RNU6-107P-201ENST00000516643 102 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 RNA5SP434-201ENST00000516647 121 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 Y_RNA.694-201ENST00000516677 117 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 RNU6-844P-201ENST00000517175 102 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 Y_RNA.757-201ENST00000578934 114 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 RPL7AP69-201ENST00000595306 806 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 SNRPGP20-201ENST00000604477 205 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 AL589743.6-201ENST00000611025 117 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 RNA5SP439-201ENST00000617595 124 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 AC103564.3-201ENST00000621194 220 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 AL133383.2-201ENST00000622958 2336 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 MIR3914-2-201ENST00000637339 95 ntBASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-1Q9BYR8 AL592437.2-201ENST00000421655 2434 ntBASIC3.05□□□□□ -1.92
KRTAP3-1Q9BYR8 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
KRTAP3-1Q9BYR8 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
KRTAP3-1Q9BYR8 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
KRTAP3-1Q9BYR8 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
KRTAP3-1Q9BYR8 AC024651.2-201ENST00000562480 2098 ntBASIC3.05□□□□□ -1.92
KRTAP3-1Q9BYR8 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
KRTAP3-1Q9BYR8 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
KRTAP3-1Q9BYR8 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC3.05□□□□□ -1.92
KRTAP3-1Q9BYR8 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC3.05□□□□□ -1.92
KRTAP3-1Q9BYR8 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
KRTAP3-1Q9BYR8 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
KRTAP3-1Q9BYR8 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
KRTAP3-1Q9BYR8 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
KRTAP3-1Q9BYR8 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
KRTAP3-1Q9BYR8 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms