Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.05□□□□□ -1.76
CHMP4AQ9BY43 YWHAZP7-201ENST00000436906 631 ntBASIC4.05□□□□□ -1.76
CHMP4AQ9BY43 AC115115.1-201ENST00000449927 248 ntBASIC4.05□□□□□ -1.76
CHMP4AQ9BY43 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.05□□□□□ -1.76
CHMP4AQ9BY43 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.05□□□□□ -1.76
CHMP4AQ9BY43 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.05□□□□□ -1.76
CHMP4AQ9BY43 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.05□□□□□ -1.76
CHMP4AQ9BY43 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.05□□□□□ -1.76
CHMP4AQ9BY43 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.05□□□□□ -1.76
CHMP4AQ9BY43 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.05□□□□□ -1.76
CHMP4AQ9BY43 AC002400.1-201ENST00000569310 726 ntBASIC4.05□□□□□ -1.76
CHMP4AQ9BY43 AC007151.1-201ENST00000572774 483 ntBASIC4.05□□□□□ -1.76
CHMP4AQ9BY43 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.05□□□□□ -1.76
CHMP4AQ9BY43 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.05□□□□□ -1.76
CHMP4AQ9BY43 OR1M4P-201ENST00000589199 287 ntBASIC4.05□□□□□ -1.76
CHMP4AQ9BY43 AC008277.2-201ENST00000605196 797 ntBASIC4.05□□□□□ -1.76
CHMP4AQ9BY43 AL161734.1-201ENST00000609720 557 ntBASIC4.05□□□□□ -1.76
CHMP4AQ9BY43 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.05□□□□□ -1.76
CHMP4AQ9BY43 AC091903.1-201ENST00000624322 454 ntBASIC4.05□□□□□ -1.76
CHMP4AQ9BY43 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CHMP4AQ9BY43 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CHMP4AQ9BY43 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC4.05□□□□□ -1.76
CHMP4AQ9BY43 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 RNA5SP383-201ENST00000362934 120 ntBASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 RNU1-73P-201ENST00000383971 164 ntBASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 RPL32P35-201ENST00000415214 394 ntBASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 AL139281.1-201ENST00000422120 335 ntBASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 LARP1BP3-201ENST00000437229 869 ntBASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 MTATP6P7-201ENST00000453315 681 ntBASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 AC013828.2-201ENST00000532487 235 ntBASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 H3F3AP1-201ENST00000559984 334 ntBASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 AC061975.8-201ENST00000587058 721 ntBASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 AL670379.6-201ENST00000603753 252 ntBASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 AL670379.11-201ENST00000604059 253 ntBASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 AC008162.1-201ENST00000604718 254 ntBASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 AL670379.1-201ENST00000604752 252 ntBASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 AC105148.1-201ENST00000604961 409 ntBASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 AL670379.5-201ENST00000605253 252 ntBASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 AL670379.12-201ENST00000605291 253 ntBASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 AL670379.8-201ENST00000605353 252 ntBASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 AL670379.7-201ENST00000605823 252 ntBASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 TUSC7.1-201ENST00000610969 165 ntBASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 AC245517.5-201ENST00000611529 162 ntBASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 AL078595.3-201ENST00000623815 1166 ntBASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 MIR7157-201ENST00000635801 60 ntBASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 MIR3199-2-201ENST00000636243 86 ntBASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.04□□□□□ -1.76
CHMP4AQ9BY43 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 RPL19P1-201ENST00000411635 428 ntBASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 AC104651.1-201ENST00000427559 735 ntBASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 GPM6BP2-201ENST00000432046 144 ntBASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 BX679664.1-201ENST00000434429 253 ntBASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 RPL7P36-201ENST00000444633 681 ntBASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 GPM6BP1-201ENST00000446387 144 ntBASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 RPL23AP70-201ENST00000483361 460 ntBASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 RNA5SP217-201ENST00000515959 91 ntBASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 SNORA74D-201ENST00000516404 141 ntBASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 AC107016.2-201ENST00000547968 190 ntBASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 AC090888.2-201ENST00000559765 1144 ntBASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 AL031281.1-201ENST00000604049 488 ntBASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 BCRP9-201ENST00000605312 388 ntBASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 AC027449.1-201ENST00000608890 407 ntBASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 U2.21-201ENST00000637295 81 ntBASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.03□□□□□ -1.76
CHMP4AQ9BY43 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.77
CHMP4AQ9BY43 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
CHMP4AQ9BY43 AC004972.1-201ENST00000623934 2209 ntBASIC4.02□□□□□ -1.77
CHMP4AQ9BY43 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CHMP4AQ9BY43 MIR513B-201ENST00000385136 84 ntBASIC4.02□□□□□ -1.77
CHMP4AQ9BY43 AL138885.1-201ENST00000405921 675 ntBASIC4.02□□□□□ -1.77
CHMP4AQ9BY43 RN7SKP123-201ENST00000410732 291 ntBASIC4.02□□□□□ -1.77
CHMP4AQ9BY43 SSR1P2-201ENST00000415208 787 ntBASIC4.02□□□□□ -1.77
CHMP4AQ9BY43 RPL23AP39-201ENST00000415533 405 ntBASIC4.02□□□□□ -1.77
CHMP4AQ9BY43 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.02□□□□□ -1.77
CHMP4AQ9BY43 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms