Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.84□□□□□ -2.11
SCAPERQ9BY12 MTCYBP12-201ENST00000440559 1134 ntBASIC1.84□□□□□ -2.11
SCAPERQ9BY12 AL360221.1-201ENST00000445989 335 ntBASIC1.84□□□□□ -2.11
SCAPERQ9BY12 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
SCAPERQ9BY12 MTND2P8-201ENST00000450555 1025 ntBASIC1.84□□□□□ -2.11
SCAPERQ9BY12 HMGB1P22-201ENST00000505315 124 ntBASIC1.84□□□□□ -2.11
SCAPERQ9BY12 AC096745.1-201ENST00000509945 370 ntBASIC1.84□□□□□ -2.11
SCAPERQ9BY12 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.84□□□□□ -2.11
SCAPERQ9BY12 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.84□□□□□ -2.11
SCAPERQ9BY12 AL731537.2-201ENST00000561565 951 ntBASIC1.84□□□□□ -2.11
SCAPERQ9BY12 AC105036.1-201ENST00000566222 271 ntBASIC1.84□□□□□ -2.11
SCAPERQ9BY12 AC024619.4-201ENST00000580924 316 ntBASIC1.84□□□□□ -2.11
SCAPERQ9BY12 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.84□□□□□ -2.11
SCAPERQ9BY12 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.84□□□□□ -2.11
SCAPERQ9BY12 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SCAPERQ9BY12 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
SCAPERQ9BY12 HNRNPDP2-201ENST00000406475 478 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 AC005297.2-201ENST00000450430 606 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 RPS24P6-201ENST00000452670 400 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 RPL21P134-201ENST00000453468 483 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 AC093852.1-201ENST00000503587 266 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 RNA5SP436-201ENST00000516020 115 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.83□□□□□ -2.12
SCAPERQ9BY12 AP001804.3-201ENST00000525146 880 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.83□□□□□ -2.12
SCAPERQ9BY12 MIR4658-201ENST00000584344 65 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SCAPERQ9BY12 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.83□□□□□ -2.12
SCAPERQ9BY12 NUTF2P8-201ENST00000604593 363 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 AC055764.2-201ENST00000610089 670 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 MIR6864-201ENST00000617935 70 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 FAM157B-203ENST00000639350 358 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 Y_RNA.36-201ENST00000362602 112 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 RNA5SP391-201ENST00000363456 119 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 RNU6-629P-201ENST00000384061 103 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 PTGES3P2-201ENST00000407942 482 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 RPS3AP44-201ENST00000425466 790 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 MTCO1P48-201ENST00000448024 1096 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 AL135752.1-201ENST00000479477 471 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC1.83□□□□□ -2.12
SCAPERQ9BY12 MTCYBP35-201ENST00000503630 1137 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 AC008837.2-201ENST00000513076 418 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.83□□□□□ -2.12
SCAPERQ9BY12 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
SCAPERQ9BY12 AC245036.5-201ENST00000596330 847 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC1.83□□□□□ -2.12
SCAPERQ9BY12 AL096840.1-201ENST00000603287 93 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 MIR7974-201ENST00000615835 79 ntBASIC1.83□□□□□ -2.12
SCAPERQ9BY12 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.83□□□□□ -2.12
SCAPERQ9BY12 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.82□□□□□ -2.12
SCAPERQ9BY12 RNU4-91P-201ENST00000364778 135 ntBASIC1.82□□□□□ -2.12
SCAPERQ9BY12 MIR758-201ENST00000390227 88 ntBASIC1.82□□□□□ -2.12
SCAPERQ9BY12 SNORD23.1-201ENST00000408212 104 ntBASIC1.82□□□□□ -2.12
SCAPERQ9BY12 AL606495.1-201ENST00000422100 813 ntBASIC1.82□□□□□ -2.12
SCAPERQ9BY12 RABEPKP1-201ENST00000440529 1026 ntBASIC1.82□□□□□ -2.12
SCAPERQ9BY12 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.82□□□□□ -2.12
SCAPERQ9BY12 AC007395.1-201ENST00000451333 677 ntBASIC1.82□□□□□ -2.12
SCAPERQ9BY12 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.82□□□□□ -2.12
SCAPERQ9BY12 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.82□□□□□ -2.12
SCAPERQ9BY12 HMGB1P46-201ENST00000520062 610 ntBASIC1.82□□□□□ -2.12
SCAPERQ9BY12 AP004371.1-201ENST00000525240 214 ntBASIC1.82□□□□□ -2.12
SCAPERQ9BY12 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.82□□□□□ -2.12
SCAPERQ9BY12 AC115085.1-201ENST00000588924 229 ntBASIC1.82□□□□□ -2.12
SCAPERQ9BY12 AC106791.2-201ENST00000604680 391 ntBASIC1.82□□□□□ -2.12
SCAPERQ9BY12 AC015726.3-201ENST00000624501 418 ntBASIC1.82□□□□□ -2.12
SCAPERQ9BY12 RNA5SP139-201ENST00000364340 117 ntBASIC1.81□□□□□ -2.12
SCAPERQ9BY12 RNU6-317P-201ENST00000384031 107 ntBASIC1.81□□□□□ -2.12
SCAPERQ9BY12 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.81□□□□□ -2.12
SCAPERQ9BY12 UBE2V1P6-201ENST00000430840 422 ntBASIC1.81□□□□□ -2.12
SCAPERQ9BY12 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SCAPERQ9BY12 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.81□□□□□ -2.12
SCAPERQ9BY12 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC1.81□□□□□ -2.12
SCAPERQ9BY12 AC093767.1-201ENST00000504523 156 ntBASIC1.81□□□□□ -2.12
SCAPERQ9BY12 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.81□□□□□ -2.12
SCAPERQ9BY12 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.81□□□□□ -2.12
SCAPERQ9BY12 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.81□□□□□ -2.12
SCAPERQ9BY12 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SCAPERQ9BY12 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SCAPERQ9BY12 RNU6-666P-201ENST00000363499 107 ntBASIC1.8□□□□□ -2.12
SCAPERQ9BY12 RNU4-42P-201ENST00000364738 142 ntBASIC1.8□□□□□ -2.12
SCAPERQ9BY12 RNU6-1072P-201ENST00000384703 107 ntBASIC1.8□□□□□ -2.12
SCAPERQ9BY12 RNU6-443P-201ENST00000384780 107 ntBASIC1.8□□□□□ -2.12
SCAPERQ9BY12 AC068050.1-201ENST00000394891 380 ntBASIC1.8□□□□□ -2.12
SCAPERQ9BY12 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC1.8□□□□□ -2.12
SCAPERQ9BY12 OR51AB1P-201ENST00000429046 620 ntBASIC1.8□□□□□ -2.12
SCAPERQ9BY12 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.8□□□□□ -2.12
SCAPERQ9BY12 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC1.8□□□□□ -2.12
SCAPERQ9BY12 AC019176.1-201ENST00000518519 225 ntBASIC1.8□□□□□ -2.12
SCAPERQ9BY12 ERHP1-201ENST00000523006 310 ntBASIC1.8□□□□□ -2.12
SCAPERQ9BY12 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.8□□□□□ -2.12
SCAPERQ9BY12 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.8□□□□□ -2.12
SCAPERQ9BY12 GLUD1P4-201ENST00000590914 418 ntBASIC1.8□□□□□ -2.12
SCAPERQ9BY12 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC1.8□□□□□ -2.12
SCAPERQ9BY12 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.8□□□□□ -2.12
SCAPERQ9BY12 AC011330.2-201ENST00000621680 635 ntBASIC1.8□□□□□ -2.12
SCAPERQ9BY12 AC020923.1-201ENST00000624021 917 ntBASIC1.8□□□□□ -2.12
SCAPERQ9BY12 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.79□□□□□ -2.12
SCAPERQ9BY12 RPS15AP40-201ENST00000419621 391 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms