Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.2□□□□□ -1.74
SALL3Q9BXA9 NDUFB9P3-201ENST00000521269 501 ntBASIC4.2□□□□□ -1.74
SALL3Q9BXA9 IGKV2D-19-201ENST00000523346 262 ntBASIC4.2□□□□□ -1.74
SALL3Q9BXA9 AC022690.1-201ENST00000526681 550 ntBASIC4.2□□□□□ -1.74
SALL3Q9BXA9 OR5B19P-201ENST00000531766 928 ntBASIC4.2□□□□□ -1.74
SALL3Q9BXA9 OR5B10P-201ENST00000532869 642 ntBASIC4.2□□□□□ -1.74
SALL3Q9BXA9 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.2□□□□□ -1.74
SALL3Q9BXA9 AC011602.1-201ENST00000546484 331 ntBASIC4.2□□□□□ -1.74
SALL3Q9BXA9 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.2□□□□□ -1.74
SALL3Q9BXA9 TGIF1P1-201ENST00000558095 802 ntBASIC4.2□□□□□ -1.74
SALL3Q9BXA9 LLPHP1-201ENST00000603571 367 ntBASIC4.2□□□□□ -1.74
SALL3Q9BXA9 U7.8-201ENST00000619968 63 ntBASIC4.2□□□□□ -1.74
SALL3Q9BXA9 AC091953.2-201ENST00000623979 160 ntBASIC4.2□□□□□ -1.74
SALL3Q9BXA9 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.2□□□□□ -1.74
SALL3Q9BXA9 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SALL3Q9BXA9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.19□□□□□ -1.74
SALL3Q9BXA9 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SALL3Q9BXA9 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.19□□□□□ -1.74
SALL3Q9BXA9 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.19□□□□□ -1.74
SALL3Q9BXA9 RNY1P12-201ENST00000364251 105 ntBASIC4.19□□□□□ -1.74
SALL3Q9BXA9 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.19□□□□□ -1.74
SALL3Q9BXA9 Y_RNA.326-201ENST00000365176 113 ntBASIC4.19□□□□□ -1.74
SALL3Q9BXA9 RNU6-359P-201ENST00000365466 108 ntBASIC4.19□□□□□ -1.74
SALL3Q9BXA9 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SALL3Q9BXA9 MIR184-201ENST00000384962 84 ntBASIC4.19□□□□□ -1.74
SALL3Q9BXA9 AC016769.3-201ENST00000396562 315 ntBASIC4.19□□□□□ -1.74
SALL3Q9BXA9 AL138878.1-201ENST00000405131 347 ntBASIC4.19□□□□□ -1.74
SALL3Q9BXA9 RNU6-55P-201ENST00000411092 107 ntBASIC4.19□□□□□ -1.74
SALL3Q9BXA9 RNA5SP31-201ENST00000411144 127 ntBASIC4.19□□□□□ -1.74
SALL3Q9BXA9 RNU6-954P-201ENST00000411355 107 ntBASIC4.19□□□□□ -1.74
SALL3Q9BXA9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.19□□□□□ -1.74
SALL3Q9BXA9 RPL31P45-201ENST00000419532 356 ntBASIC4.19□□□□□ -1.74
SALL3Q9BXA9 NCOR1P3-201ENST00000420479 303 ntBASIC4.19□□□□□ -1.74
SALL3Q9BXA9 AL365400.1-201ENST00000431854 640 ntBASIC4.19□□□□□ -1.74
SALL3Q9BXA9 RPS6P12-201ENST00000432491 726 ntBASIC4.19□□□□□ -1.74
SALL3Q9BXA9 RPL36AP53-201ENST00000432891 316 ntBASIC4.19□□□□□ -1.74
SALL3Q9BXA9 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.19□□□□□ -1.74
SALL3Q9BXA9 RPL7P28-201ENST00000437739 740 ntBASIC4.19□□□□□ -1.74
SALL3Q9BXA9 MTCYBP6-201ENST00000441810 138 ntBASIC4.19□□□□□ -1.74
SALL3Q9BXA9 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.19□□□□□ -1.74
SALL3Q9BXA9 RPS20P32-201ENST00000456044 356 ntBASIC4.19□□□□□ -1.74
SALL3Q9BXA9 RPL37P6-202ENST00000464216 403 ntBASIC4.19□□□□□ -1.74
SALL3Q9BXA9 RPL21P103-201ENST00000479921 488 ntBASIC4.19□□□□□ -1.74
SALL3Q9BXA9 RPL23AP41-201ENST00000484754 458 ntBASIC4.19□□□□□ -1.74
SALL3Q9BXA9 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SALL3Q9BXA9 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.19□□□□□ -1.74
SALL3Q9BXA9 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.19□□□□□ -1.74
SALL3Q9BXA9 AC243972.3-201ENST00000539655 198 ntBASIC4.19□□□□□ -1.74
SALL3Q9BXA9 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.19□□□□□ -1.74
SALL3Q9BXA9 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.19□□□□□ -1.74
SALL3Q9BXA9 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.19□□□□□ -1.74
SALL3Q9BXA9 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.19□□□□□ -1.74
SALL3Q9BXA9 SNORA51-201ENST00000606420 132 ntBASIC4.19□□□□□ -1.74
SALL3Q9BXA9 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.19□□□□□ -1.74
SALL3Q9BXA9 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SALL3Q9BXA9 ZNF33CP-201ENST00000432492 2030 ntBASIC4.18□□□□□ -1.74
SALL3Q9BXA9 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SALL3Q9BXA9 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.18□□□□□ -1.74
SALL3Q9BXA9 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.18□□□□□ -1.74
SALL3Q9BXA9 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SALL3Q9BXA9 SNORA71.3-201ENST00000362582 128 ntBASIC4.18□□□□□ -1.74
SALL3Q9BXA9 RNU6-853P-201ENST00000364306 107 ntBASIC4.18□□□□□ -1.74
SALL3Q9BXA9 RNU6-74P-201ENST00000384235 107 ntBASIC4.18□□□□□ -1.74
SALL3Q9BXA9 MIR490-201ENST00000384865 128 ntBASIC4.18□□□□□ -1.74
SALL3Q9BXA9 RNU6-510P-201ENST00000391239 108 ntBASIC4.18□□□□□ -1.74
SALL3Q9BXA9 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SALL3Q9BXA9 AL354719.1-201ENST00000406535 843 ntBASIC4.18□□□□□ -1.74
SALL3Q9BXA9 RNA5SP239-201ENST00000410218 129 ntBASIC4.18□□□□□ -1.74
SALL3Q9BXA9 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.18□□□□□ -1.74
SALL3Q9BXA9 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.18□□□□□ -1.74
SALL3Q9BXA9 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.18□□□□□ -1.74
SALL3Q9BXA9 RPL35AP12-201ENST00000425362 338 ntBASIC4.18□□□□□ -1.74
SALL3Q9BXA9 GOT2P5-201ENST00000433995 546 ntBASIC4.18□□□□□ -1.74
SALL3Q9BXA9 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.18□□□□□ -1.74
SALL3Q9BXA9 CYCSP43-201ENST00000438233 310 ntBASIC4.18□□□□□ -1.74
SALL3Q9BXA9 AL049734.2-201ENST00000441066 616 ntBASIC4.18□□□□□ -1.74
SALL3Q9BXA9 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.18□□□□□ -1.74
SALL3Q9BXA9 FTH1P25-201ENST00000447665 469 ntBASIC4.18□□□□□ -1.74
SALL3Q9BXA9 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.18□□□□□ -1.74
SALL3Q9BXA9 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.18□□□□□ -1.74
SALL3Q9BXA9 AC010401.1-201ENST00000463867 348 ntBASIC4.18□□□□□ -1.74
SALL3Q9BXA9 SNORA70.19-201ENST00000516717 90 ntBASIC4.18□□□□□ -1.74
SALL3Q9BXA9 RN7SKP234-201ENST00000517173 224 ntBASIC4.18□□□□□ -1.74
SALL3Q9BXA9 AC090572.1-201ENST00000519251 160 ntBASIC4.18□□□□□ -1.74
SALL3Q9BXA9 AC105029.1-201ENST00000520250 669 ntBASIC4.18□□□□□ -1.74
SALL3Q9BXA9 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SALL3Q9BXA9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.18□□□□□ -1.74
SALL3Q9BXA9 AC078814.3-201ENST00000553036 491 ntBASIC4.18□□□□□ -1.74
SALL3Q9BXA9 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.18□□□□□ -1.74
SALL3Q9BXA9 AP001836.1-201ENST00000604675 523 ntBASIC4.18□□□□□ -1.74
SALL3Q9BXA9 AL121655.1-201ENST00000605811 308 ntBASIC4.18□□□□□ -1.74
SALL3Q9BXA9 AC105429.2-201ENST00000610567 517 ntBASIC4.18□□□□□ -1.74
SALL3Q9BXA9 MTND5P33-201ENST00000571250 1450 ntBASIC4.18□□□□□ -1.74
SALL3Q9BXA9 AC092125.1-201ENST00000562568 1995 ntBASIC4.17□□□□□ -1.74
SALL3Q9BXA9 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.17□□□□□ -1.74
SALL3Q9BXA9 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SALL3Q9BXA9 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.17□□□□□ -1.74
SALL3Q9BXA9 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SALL3Q9BXA9 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SALL3Q9BXA9 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms