Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 MRPS31P2-201ENST00000451581 518 ntBASIC5.25□□□□□ -1.57
TRAIPQ9BWF2 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.25□□□□□ -1.57
TRAIPQ9BWF2 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.25□□□□□ -1.57
TRAIPQ9BWF2 AC133473.1-201ENST00000455173 299 ntBASIC5.25□□□□□ -1.57
TRAIPQ9BWF2 RPL23AP24-201ENST00000458203 385 ntBASIC5.25□□□□□ -1.57
TRAIPQ9BWF2 RN7SL558P-201ENST00000497468 299 ntBASIC5.25□□□□□ -1.57
TRAIPQ9BWF2 MTND5P5-201ENST00000503764 376 ntBASIC5.25□□□□□ -1.57
TRAIPQ9BWF2 RAB9BP1-201ENST00000519581 626 ntBASIC5.25□□□□□ -1.57
TRAIPQ9BWF2 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC5.25□□□□□ -1.57
TRAIPQ9BWF2 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.25□□□□□ -1.57
TRAIPQ9BWF2 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRAIPQ9BWF2 AC126177.8-201ENST00000618339 1015 ntBASIC5.25□□□□□ -1.57
TRAIPQ9BWF2 AL022401.1-201ENST00000619498 108 ntBASIC5.25□□□□□ -1.57
TRAIPQ9BWF2 OTUD4P1-201ENST00000237841 3067 ntBASIC5.25□□□□□ -1.57
TRAIPQ9BWF2 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRAIPQ9BWF2 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.25□□□□□ -1.57
TRAIPQ9BWF2 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.25□□□□□ -1.57
TRAIPQ9BWF2 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
TRAIPQ9BWF2 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRAIPQ9BWF2 EOGT-210ENST00000615922 1931 ntBASIC5.25□□□□□ -1.57
TRAIPQ9BWF2 AC007496.3-201ENST00000624987 3443 ntBASIC5.25□□□□□ -1.57
TRAIPQ9BWF2 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 AC002546.1-201ENST00000588041 2504 ntBASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 Y_RNA.135-201ENST00000363439 95 ntBASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 SNORD14B-201ENST00000364533 90 ntBASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 RNU6-658P-201ENST00000384606 106 ntBASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 MIR888-201ENST00000401186 77 ntBASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 MTND1P17-201ENST00000448961 204 ntBASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 AL591473.1-201ENST00000464297 313 ntBASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 AC020890.1-201ENST00000491837 504 ntBASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 RNU1-6P-201ENST00000516290 144 ntBASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 RNU1-103P-201ENST00000516502 125 ntBASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 AP000787.2-201ENST00000604432 568 ntBASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 AC007938.3-201ENST00000604965 623 ntBASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 uc_338.32-201ENST00000615087 172 ntBASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 AC125257.1-201ENST00000560400 2930 ntBASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
TRAIPQ9BWF2 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 SNORD113.2-201ENST00000364166 89 ntBASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 Y_RNA.259-201ENST00000364619 101 ntBASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 Y_RNA.339-201ENST00000365325 102 ntBASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 SNORA75B-201ENST00000384053 137 ntBASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 RNA5SP332-201ENST00000391063 115 ntBASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 RPL21P17-201ENST00000397467 475 ntBASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 RPL5P18-201ENST00000406671 891 ntBASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 RPL23AP48-201ENST00000406913 488 ntBASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 MIR1271-201ENST00000408537 86 ntBASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 VDAC1P9-201ENST00000412766 841 ntBASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 AL592148.1-201ENST00000413568 445 ntBASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 AL353729.1-201ENST00000425044 720 ntBASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 DNAJC19P7-201ENST00000428811 344 ntBASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 FABP5P14-201ENST00000437273 393 ntBASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 DCLRE1CP1-201ENST00000454630 470 ntBASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 RPL12P20-201ENST00000475538 479 ntBASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 RNA5SP249-201ENST00000516127 99 ntBASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 FRG2DP-202ENST00000566967 323 ntBASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 SNORA74C-1-201ENST00000580726 201 ntBASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 POLR3GP2-201ENST00000588366 668 ntBASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 MIR378J-201ENST00000611988 109 ntBASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 AL442067.2-201ENST00000614033 363 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms