Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 ELOCP5-201ENST00000604924 333 ntBASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 AC034102.8-201ENST00000615146 484 ntBASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 AC078938.1-201ENST00000620993 318 ntBASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 AP002799.1-201ENST00000623552 423 ntBASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 AC138627.2-201ENST00000624202 601 ntBASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 U6.104-201ENST00000637979 90 ntBASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 Z73965.1-201ENST00000623412 2297 ntBASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 AC083843.3-201ENST00000623679 2186 ntBASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 Y_RNA.151-201ENST00000363566 112 ntBASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 RNU6-173P-201ENST00000364215 104 ntBASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 RNA5SP428-201ENST00000365129 132 ntBASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 RNU6-1074P-201ENST00000383995 104 ntBASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 Y_RNA.461-201ENST00000384263 103 ntBASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 SYF2P2-201ENST00000417620 583 ntBASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 RPL26P6-201ENST00000440913 438 ntBASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 DAP3P1-201ENST00000441522 278 ntBASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 AC087588.1-201ENST00000462203 316 ntBASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 COX6B1P5-201ENST00000509843 249 ntBASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 AL671862.1-201ENST00000515851 349 ntBASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 AC011447.4-201ENST00000587562 111 ntBASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM56Q9BRZ2 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 EOGT-210ENST00000615922 1931 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 AC099654.2-201ENST00000433031 1980 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 RNU6-288P-201ENST00000363690 104 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 Y_RNA.276-201ENST00000364732 109 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 RNU6-596P-201ENST00000365395 98 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 Y_RNA.350-201ENST00000365409 98 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 RPL37P18-201ENST00000411602 243 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 AL513331.1-201ENST00000411908 397 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 DDX39BP1-205ENST00000422507 192 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 EIF4HP2-201ENST00000424380 563 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 AL133396.1-201ENST00000432048 687 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 AC093414.1-201ENST00000434712 514 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 SUMO1P3-201ENST00000439961 304 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 FTH1P25-201ENST00000447665 469 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 OR1H1P-201ENST00000448731 937 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 RPS24P6-201ENST00000452670 400 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 FTH1P2-201ENST00000466086 412 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 RPL23AP2-201ENST00000471227 466 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 AC018437.1-201ENST00000492214 406 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 AC093852.1-201ENST00000503587 266 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 AC105758.1-201ENST00000506038 399 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 RN7SKP66-201ENST00000516681 231 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 IGHV3-76-201ENST00000522465 295 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 AC008489.1-201ENST00000524271 483 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 AL049839.1-201ENST00000556151 657 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 AC008669.1-201ENST00000565823 2178 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 AC084783.1-201ENST00000565846 910 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 AC093227.2-201ENST00000589357 285 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 MIR15A-201ENST00000607334 83 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 MIR4272-201ENST00000635924 64 ntBASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.93□□□□□ -1.62
TRIM56Q9BRZ2 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 MTND5P27-201ENST00000428871 1720 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 AC004925.1-201ENST00000624256 2706 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms