Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 BCRP9-201ENST00000605312 388 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 RNU6-88P-201ENST00000606801 100 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 AC073114.1-201ENST00000612027 490 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 AL031667.3-201ENST00000620124 655 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 AC008443.7-201ENST00000622195 246 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 Z69908.1-201ENST00000622603 247 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 PCMTD1P7-201ENST00000634506 357 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.57□□□□□ -2
EBF4Q9BQW3 MTND4P16-201ENST00000466108 1367 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 AC092104.1-201ENST00000497346 1441 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
EBF4Q9BQW3 RNU6-500P-201ENST00000362349 107 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 RNU5E-8P-201ENST00000363502 116 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 SNORD56.5-201ENST00000364281 72 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 Y_RNA.302-201ENST00000364997 102 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 MT-TH-201ENST00000387441 69 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 SNORA26.8-201ENST00000391306 124 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 RN7SKP266-201ENST00000410232 287 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 RNA5SP181-201ENST00000410246 98 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 TPMTP3-201ENST00000411928 735 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 HMGN2P35-201ENST00000412164 270 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.56□□□□□ -2
EBF4Q9BQW3 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.56□□□□□ -2
EBF4Q9BQW3 AL035407.1-201ENST00000429211 571 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 UBBP3-201ENST00000445497 241 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 Z96811.1-201ENST00000445880 108 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 MTND1P29-201ENST00000448112 647 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 ZNF114P1-201ENST00000453500 292 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.56□□□□□ -2
EBF4Q9BQW3 RPS23P3-201ENST00000470993 430 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.56□□□□□ -2
EBF4Q9BQW3 AIG1P1-201ENST00000503376 148 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 AC091435.1-201ENST00000505442 584 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.56□□□□□ -2
EBF4Q9BQW3 AC022483.1-201ENST00000514020 567 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.56□□□□□ -2
EBF4Q9BQW3 AL391156.1-201ENST00000554965 554 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 H3F3AP1-201ENST00000559984 334 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.56□□□□□ -2
EBF4Q9BQW3 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 MIR544B-201ENST00000582372 78 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 MIR3158-1-201ENST00000583596 81 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.56□□□□□ -2
EBF4Q9BQW3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.56□□□□□ -2
EBF4Q9BQW3 AC060766.3-201ENST00000591442 263 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.56□□□□□ -2
EBF4Q9BQW3 AC103710.4-201ENST00000609301 899 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 AL161637.1-201ENST00000622380 412 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 AL356266.1-201ENST00000623311 483 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.56□□□□□ -2
EBF4Q9BQW3 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 AC233263.6-201ENST00000631132 1963 ntBASIC2.56□□□□□ -2
EBF4Q9BQW3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
EBF4Q9BQW3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
EBF4Q9BQW3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.55□□□□□ -2
EBF4Q9BQW3 MIR449B-201ENST00000384995 97 ntBASIC2.55□□□□□ -2
EBF4Q9BQW3 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
EBF4Q9BQW3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
EBF4Q9BQW3 AL139095.1-201ENST00000404326 391 ntBASIC2.55□□□□□ -2
EBF4Q9BQW3 MTCO1P17-201ENST00000411522 491 ntBASIC2.55□□□□□ -2
EBF4Q9BQW3 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.55□□□□□ -2
EBF4Q9BQW3 AL096701.2-201ENST00000416920 238 ntBASIC2.55□□□□□ -2
EBF4Q9BQW3 CCDC58P2-201ENST00000417131 366 ntBASIC2.55□□□□□ -2
EBF4Q9BQW3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.55□□□□□ -2
EBF4Q9BQW3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.55□□□□□ -2
EBF4Q9BQW3 PPP1R11P2-201ENST00000423543 382 ntBASIC2.55□□□□□ -2
EBF4Q9BQW3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.55□□□□□ -2
EBF4Q9BQW3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.55□□□□□ -2
EBF4Q9BQW3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.55□□□□□ -2
EBF4Q9BQW3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.55□□□□□ -2
EBF4Q9BQW3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.55□□□□□ -2
EBF4Q9BQW3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.55□□□□□ -2
EBF4Q9BQW3 AL445523.1-201ENST00000451184 1362 ntBASIC2.55□□□□□ -2
EBF4Q9BQW3 AC234775.1-201ENST00000454247 670 ntBASIC2.55□□□□□ -2
EBF4Q9BQW3 AL359385.1-201ENST00000456509 365 ntBASIC2.55□□□□□ -2
EBF4Q9BQW3 FAM133DP-201ENST00000464802 691 ntBASIC2.55□□□□□ -2
EBF4Q9BQW3 RPL30P6-201ENST00000475925 342 ntBASIC2.55□□□□□ -2
EBF4Q9BQW3 RAP1BP2-201ENST00000478270 544 ntBASIC2.55□□□□□ -2
EBF4Q9BQW3 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.55□□□□□ -2
EBF4Q9BQW3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.55□□□□□ -2
EBF4Q9BQW3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.55□□□□□ -2
EBF4Q9BQW3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.55□□□□□ -2
EBF4Q9BQW3 MTND5P4-201ENST00000514978 288 ntBASIC2.55□□□□□ -2
EBF4Q9BQW3 RNA5SP216-201ENST00000516111 123 ntBASIC2.55□□□□□ -2
EBF4Q9BQW3 SNORA67.7-201ENST00000516664 135 ntBASIC2.55□□□□□ -2
EBF4Q9BQW3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.55□□□□□ -2
EBF4Q9BQW3 CKS1BP7-201ENST00000522230 235 ntBASIC2.55□□□□□ -2
EBF4Q9BQW3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.55□□□□□ -2
EBF4Q9BQW3 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.55□□□□□ -2
EBF4Q9BQW3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.55□□□□□ -2
EBF4Q9BQW3 AC002400.1-201ENST00000569310 726 ntBASIC2.55□□□□□ -2
EBF4Q9BQW3 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.55□□□□□ -2
EBF4Q9BQW3 AC138761.3-201ENST00000579993 334 ntBASIC2.55□□□□□ -2
EBF4Q9BQW3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.55□□□□□ -2
EBF4Q9BQW3 AC105224.1-201ENST00000587055 421 ntBASIC2.55□□□□□ -2
EBF4Q9BQW3 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.55□□□□□ -2
EBF4Q9BQW3 TPMTP1-201ENST00000592307 737 ntBASIC2.55□□□□□ -2
EBF4Q9BQW3 YPEL5P2-201ENST00000605553 359 ntBASIC2.55□□□□□ -2
EBF4Q9BQW3 AL031775.1-201ENST00000607014 887 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms