Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 RNU6-434P-201ENST00000384376 107 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 RNU1-44P-201ENST00000384453 163 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 RNU6-393P-201ENST00000384475 107 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 SNORD70.1-201ENST00000391007 85 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 RNU4-25P-201ENST00000410569 230 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 RN7SKP167-201ENST00000411047 285 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 Z85995.1-201ENST00000415547 335 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 BX842559.1-201ENST00000419615 532 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 NCOR1P3-201ENST00000420479 303 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 AL356387.2-201ENST00000422272 243 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 TAAR7P-201ENST00000436141 242 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.87□□□□□ -1.79
VRK1Q99986 ISCUP1-201ENST00000454451 448 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 AC012181.1-201ENST00000479895 423 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 RPL21P93-201ENST00000480465 489 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.87□□□□□ -1.79
VRK1Q99986 AL592156.1-201ENST00000508758 304 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 RNU4-49P-201ENST00000516080 140 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 RNU6-1038P-201ENST00000516516 104 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.87□□□□□ -1.79
VRK1Q99986 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.87□□□□□ -1.79
VRK1Q99986 RANP9-201ENST00000519957 271 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.87□□□□□ -1.79
VRK1Q99986 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.87□□□□□ -1.79
VRK1Q99986 AC004024.1-201ENST00000549244 247 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.87□□□□□ -1.79
VRK1Q99986 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.87□□□□□ -1.79
VRK1Q99986 CYP4A43P-201ENST00000568156 121 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 RPS3AP23-202ENST00000574601 686 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 MIR4742-201ENST00000581069 85 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 BNIP3P25-201ENST00000596023 559 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 AL592436.1-201ENST00000605135 558 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.87□□□□□ -1.79
VRK1Q99986 AC087045.1-201ENST00000605856 382 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 AL022345.1-201ENST00000607292 135 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.87□□□□□ -1.79
VRK1Q99986 AL138721.1-201ENST00000616756 179 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 AC103858.2-201ENST00000621471 543 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 AP003400.5-201ENST00000624827 617 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.87□□□□□ -1.79
VRK1Q99986 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
VRK1Q99986 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VRK1Q99986 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
VRK1Q99986 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
VRK1Q99986 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VRK1Q99986 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.87□□□□□ -1.79
VRK1Q99986 MTND4P29-201ENST00000503122 1372 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VRK1Q99986 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.87□□□□□ -1.79
VRK1Q99986 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VRK1Q99986 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VRK1Q99986 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VRK1Q99986 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
VRK1Q99986 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VRK1Q99986 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
VRK1Q99986 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
VRK1Q99986 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.86□□□□□ -1.79
VRK1Q99986 RNU6-1167P-201ENST00000363227 94 ntBASIC3.86□□□□□ -1.79
VRK1Q99986 SNORA70.2-201ENST00000364506 135 ntBASIC3.86□□□□□ -1.79
VRK1Q99986 RNA5SP509-201ENST00000364577 119 ntBASIC3.86□□□□□ -1.79
VRK1Q99986 RNU6-831P-201ENST00000384548 107 ntBASIC3.86□□□□□ -1.79
VRK1Q99986 Y_RNA.529-201ENST00000384586 119 ntBASIC3.86□□□□□ -1.79
VRK1Q99986 SDHCP2-201ENST00000398565 501 ntBASIC3.86□□□□□ -1.79
VRK1Q99986 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.86□□□□□ -1.79
VRK1Q99986 HSPE1P1-201ENST00000421494 318 ntBASIC3.86□□□□□ -1.79
VRK1Q99986 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.86□□□□□ -1.79
VRK1Q99986 AL669831.1-202ENST00000428504 417 ntBASIC3.86□□□□□ -1.79
VRK1Q99986 AL590383.1-201ENST00000428602 75 ntBASIC3.86□□□□□ -1.79
VRK1Q99986 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.86□□□□□ -1.79
VRK1Q99986 GTF2IP13-201ENST00000438487 386 ntBASIC3.86□□□□□ -1.79
VRK1Q99986 RPS24P13-201ENST00000442520 397 ntBASIC3.86□□□□□ -1.79
VRK1Q99986 PRPS1P1-201ENST00000445305 876 ntBASIC3.86□□□□□ -1.79
VRK1Q99986 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.86□□□□□ -1.79
VRK1Q99986 AC092001.1-201ENST00000453012 261 ntBASIC3.86□□□□□ -1.79
VRK1Q99986 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.86□□□□□ -1.79
VRK1Q99986 AC109327.1-201ENST00000471666 403 ntBASIC3.86□□□□□ -1.79
VRK1Q99986 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.86□□□□□ -1.79
VRK1Q99986 RNU6-189P-201ENST00000516120 101 ntBASIC3.86□□□□□ -1.79
VRK1Q99986 RNU6-1256P-201ENST00000516539 103 ntBASIC3.86□□□□□ -1.79
VRK1Q99986 RNA5SP468-201ENST00000516782 93 ntBASIC3.86□□□□□ -1.79
VRK1Q99986 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.86□□□□□ -1.79
VRK1Q99986 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.86□□□□□ -1.79
VRK1Q99986 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.86□□□□□ -1.79
VRK1Q99986 AC023575.1-201ENST00000580510 358 ntBASIC3.86□□□□□ -1.79
VRK1Q99986 MIR3941-201ENST00000582572 103 ntBASIC3.86□□□□□ -1.79
VRK1Q99986 ARF4P1-201ENST00000605447 541 ntBASIC3.86□□□□□ -1.79
VRK1Q99986 AC005858.4-201ENST00000623191 700 ntBASIC3.86□□□□□ -1.79
VRK1Q99986 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.86□□□□□ -1.79
VRK1Q99986 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.86□□□□□ -1.79
VRK1Q99986 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.86□□□□□ -1.79
VRK1Q99986 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.86□□□□□ -1.79
VRK1Q99986 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.86□□□□□ -1.79
VRK1Q99986 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.86□□□□□ -1.79
VRK1Q99986 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
VRK1Q99986 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VRK1Q99986 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.86□□□□□ -1.79
VRK1Q99986 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
VRK1Q99986 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms