Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 SNORA33-201ENST00000363664 130 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RNU6-289P-201ENST00000364093 107 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RNU6-517P-201ENST00000384362 110 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 MIR3065-201ENST00000390137 79 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RN7SKP16-201ENST00000410180 299 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RNU2-41P-201ENST00000410991 178 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 HIGD1AP15-201ENST00000416198 280 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 XKRYP1-201ENST00000423438 492 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC087650.1-201ENST00000431445 468 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 XKRYP2-201ENST00000432915 492 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC093155.1-201ENST00000440164 826 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AL500527.1-201ENST00000448532 255 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AP002345.1-201ENST00000456493 928 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RPS23P3-201ENST00000470993 430 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RPS4XP6-201ENST00000477670 797 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC092045.1-201ENST00000495716 1231 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC109329.1-201ENST00000518744 317 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC127455.1-201ENST00000565496 145 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 HMGN1P30-201ENST00000589286 268 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AP000907.4-201ENST00000604143 237 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 U4.1-201ENST00000620349 87 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC127459.3-201ENST00000624328 466 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 Y_RNA.165-201ENST00000363721 102 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 Y_RNA.447-201ENST00000384184 113 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 Y_RNA.472-201ENST00000384322 102 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 MIR640-201ENST00000385086 96 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RPL21P1-201ENST00000399532 476 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 USP9YP7-201ENST00000436723 430 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC009237.7-201ENST00000447357 229 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RPL29P29-201ENST00000448725 423 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 USP9YP32-201ENST00000452432 430 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RNA5SP449-201ENST00000516871 130 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 SCARNA24.2-201ENST00000516968 130 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 HPRT1P3-201ENST00000539521 576 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 HIGD1AP1-201ENST00000550979 275 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC019322.1-201ENST00000571869 389 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 VN1R79P-201ENST00000593540 513 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 MIR8069-1-201ENST00000616627 86 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 MIR8069-2-201ENST00000621412 86 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RMST_7.1-201ENST00000621935 268 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 FP236240.3-201ENST00000623061 327 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC095038.3-201ENST00000634439 195 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 FP325330.3-201ENST00000623760 9537 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AL731532.1-201ENST00000623972 4236 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 SCARNA15-201ENST00000607520 4325 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 DNM1P47-203ENST00000571780 12667 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 MIR30B-201ENST00000384850 88 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC114878.1-201ENST00000441166 358 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 PTMAP3-201ENST00000447474 330 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RPL23AP23-201ENST00000452590 471 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC245047.8-201ENST00000456455 284 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RNU6-329P-201ENST00000459618 107 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AL163973.1-201ENST00000484753 577 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RN7SKP67-201ENST00000515905 235 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC008489.1-201ENST00000524271 483 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 CYP4A27P-201ENST00000567218 190 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 MIR3162-201ENST00000581818 82 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC006116.10-201ENST00000591836 581 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms