Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC00477Q96M19 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC00477Q96M19 AC093809.1-201ENST00000509155 340 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 GMPSP1-201ENST00000514075 579 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 SNORA70.16-201ENST00000516390 95 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 RNU6-232P-201ENST00000517144 64 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC00477Q96M19 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.1□□□□□ -2.07
LINC00477Q96M19 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC00477Q96M19 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC00477Q96M19 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC00477Q96M19 AC090888.1-201ENST00000561335 1141 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.1□□□□□ -2.07
LINC00477Q96M19 AP005136.1-201ENST00000579765 429 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 MIR4307-201ENST00000582802 84 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 MIR548AB-201ENST00000584917 84 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 VN1R92P-201ENST00000598511 928 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 BNIP3P23-201ENST00000599655 511 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 AP000403.1-201ENST00000603349 851 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 AC004852.3-201ENST00000614131 326 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 SNHG22-203ENST00000617833 660 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 AC007494.3-201ENST00000624660 743 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 CU459211.1-201ENST00000635667 749 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 CRYM-AS1-204ENST00000637983 556 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 AC099063.3-201ENST00000642066 185 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC00477Q96M19 CCT4P2-201ENST00000233836 1548 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.07
LINC00477Q96M19 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.09□□□□□ -2.07
LINC00477Q96M19 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
LINC00477Q96M19 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
LINC00477Q96M19 MIR422A-201ENST00000362286 90 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 RNA5SP374-201ENST00000362939 125 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 MIR23B-201ENST00000384832 97 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 MIR592-201ENST00000384959 97 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 AL138885.1-201ENST00000405921 675 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 AL513475.1-201ENST00000406602 315 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.09□□□□□ -2.07
LINC00477Q96M19 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.09□□□□□ -2.07
LINC00477Q96M19 AC107081.1-201ENST00000414975 361 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.09□□□□□ -2.07
LINC00477Q96M19 AL365496.1-201ENST00000426885 215 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 AL035407.1-201ENST00000429211 571 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 MTND5P25-201ENST00000430499 799 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 AC024082.2-201ENST00000434771 238 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 AC090774.1-201ENST00000435925 246 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC00477Q96M19 MTATP6P30-201ENST00000443540 664 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 FAM103A2P-201ENST00000444122 354 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 TPT1P14-201ENST00000448018 505 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.09□□□□□ -2.07
LINC00477Q96M19 KATNBL1P6-201ENST00000453433 915 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 MTCO1P42-201ENST00000457379 726 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 AC003982.1-202ENST00000469928 248 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 MTND3P7-201ENST00000474435 343 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 RBM43P1-201ENST00000476891 1081 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 LINC00888-204ENST00000487386 421 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
LINC00477Q96M19 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
LINC00477Q96M19 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.09□□□□□ -2.07
LINC00477Q96M19 AC024589.1-201ENST00000512207 263 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.09□□□□□ -2.07
LINC00477Q96M19 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.09□□□□□ -2.07
LINC00477Q96M19 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LINC00477Q96M19 AL133271.1-201ENST00000538229 291 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 ELOCP31-201ENST00000540463 467 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC00477Q96M19 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC00477Q96M19 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.09□□□□□ -2.07
LINC00477Q96M19 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC00477Q96M19 AL355836.1-201ENST00000555951 870 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.09□□□□□ -2.07
LINC00477Q96M19 AC012414.6-201ENST00000568241 401 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC00477Q96M19 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.09□□□□□ -2.07
LINC00477Q96M19 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC00477Q96M19 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.09□□□□□ -2.07
LINC00477Q96M19 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC00477Q96M19 NRBF2P5-201ENST00000603087 788 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 SRGNP1-201ENST00000603392 451 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 AL049779.4-201ENST00000604500 156 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 YPEL5P2-201ENST00000605553 359 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 AC012443.1-201ENST00000605605 231 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 AL355472.4-201ENST00000610233 626 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 AL603758.1-201ENST00000618654 241 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 MIR6075-201ENST00000620782 95 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 AC091965.5-201ENST00000624785 342 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 AC097655.1-201ENST00000635075 318 ntBASIC2.09□□□□□ -2.07
LINC00477Q96M19 AC012321.1-201ENST00000561622 1588 ntBASIC2.09□□□□□ -2.08
LINC00477Q96M19 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
LINC00477Q96M19 MTND5P1-201ENST00000445440 1375 ntBASIC2.09□□□□□ -2.08
LINC00477Q96M19 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.09□□□□□ -2.08
LINC00477Q96M19 AC093536.2-201ENST00000565257 1406 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
LINC00477Q96M19 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.08□□□□□ -2.08
LINC00477Q96M19 RNU5F-6P-201ENST00000362979 116 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms