Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC239860.2-201ENST00000525886 270 ntBASIC0.92□□□□□ -2.26
SPG11Q96JI7 AC118942.1-201ENST00000529674 1035 ntBASIC0.92□□□□□ -2.26
SPG11Q96JI7 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.92□□□□□ -2.26
SPG11Q96JI7 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.92□□□□□ -2.26
SPG11Q96JI7 SUMO2P12-201ENST00000405924 140 ntBASIC0.91□□□□□ -2.26
SPG11Q96JI7 HMGB1P49-201ENST00000418882 569 ntBASIC0.91□□□□□ -2.26
SPG11Q96JI7 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
SPG11Q96JI7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.91□□□□□ -2.26
SPG11Q96JI7 BZW1P2-201ENST00000473537 826 ntBASIC0.91□□□□□ -2.26
SPG11Q96JI7 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC0.91□□□□□ -2.26
SPG11Q96JI7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC0.91□□□□□ -2.26
SPG11Q96JI7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC0.91□□□□□ -2.26
SPG11Q96JI7 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
SPG11Q96JI7 AC021755.4-201ENST00000616620 456 ntBASIC0.91□□□□□ -2.26
SPG11Q96JI7 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC0.91□□□□□ -2.26
SPG11Q96JI7 MIR4278-201ENST00000636094 69 ntBASIC0.91□□□□□ -2.26
SPG11Q96JI7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.91□□□□□ -2.26
SPG11Q96JI7 OR5AQ1P-202ENST00000641257 1534 ntBASIC0.91□□□□□ -2.26
SPG11Q96JI7 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC0.91□□□□□ -2.26
SPG11Q96JI7 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC0.91□□□□□ -2.26
SPG11Q96JI7 AC244636.1-201ENST00000421152 228 ntBASIC0.91□□□□□ -2.26
SPG11Q96JI7 AC104806.1-201ENST00000508720 308 ntBASIC0.91□□□□□ -2.26
SPG11Q96JI7 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.91□□□□□ -2.26
SPG11Q96JI7 AL391261.3-201ENST00000557194 520 ntBASIC0.91□□□□□ -2.26
SPG11Q96JI7 ZNF192P1-203ENST00000565888 810 ntBASIC0.91□□□□□ -2.26
SPG11Q96JI7 AC006270.3-201ENST00000605967 1036 ntBASIC0.91□□□□□ -2.26
SPG11Q96JI7 AC000123.2-201ENST00000623124 461 ntBASIC0.91□□□□□ -2.26
SPG11Q96JI7 RNU1-52P-201ENST00000384190 164 ntBASIC0.9□□□□□ -2.26
SPG11Q96JI7 RNU1-148P-201ENST00000384472 162 ntBASIC0.9□□□□□ -2.26
SPG11Q96JI7 MIR532-201ENST00000385025 91 ntBASIC0.9□□□□□ -2.26
SPG11Q96JI7 MIR329-2-201ENST00000385029 84 ntBASIC0.9□□□□□ -2.26
SPG11Q96JI7 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
SPG11Q96JI7 HMGB3P30-201ENST00000457863 606 ntBASIC0.9□□□□□ -2.26
SPG11Q96JI7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.9□□□□□ -2.26
SPG11Q96JI7 AC104685.1-201ENST00000502445 371 ntBASIC0.9□□□□□ -2.26
SPG11Q96JI7 SNORA48.9-201ENST00000516419 162 ntBASIC0.9□□□□□ -2.26
SPG11Q96JI7 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.9□□□□□ -2.26
SPG11Q96JI7 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC0.9□□□□□ -2.26
SPG11Q96JI7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC0.9□□□□□ -2.26
SPG11Q96JI7 MIR4714-201ENST00000580728 77 ntBASIC0.9□□□□□ -2.26
SPG11Q96JI7 AC083899.3-201ENST00000603413 594 ntBASIC0.9□□□□□ -2.26
SPG11Q96JI7 AC008962.1-201ENST00000605729 304 ntBASIC0.9□□□□□ -2.26
SPG11Q96JI7 AC073544.1-201ENST00000600110 1595 ntBASIC0.9□□□□□ -2.26
SPG11Q96JI7 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
SPG11Q96JI7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC0.9□□□□□ -2.27
SPG11Q96JI7 AC010889.1-201ENST00000566193 2666 ntBASIC0.9□□□□□ -2.27
SPG11Q96JI7 RNA5SP25-201ENST00000410815 110 ntBASIC0.9□□□□□ -2.27
SPG11Q96JI7 AC019070.1-201ENST00000415008 1024 ntBASIC0.9□□□□□ -2.27
SPG11Q96JI7 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC0.9□□□□□ -2.27
SPG11Q96JI7 Z75741.2-201ENST00000417272 1167 ntBASIC0.9□□□□□ -2.27
SPG11Q96JI7 AL627224.1-201ENST00000448334 444 ntBASIC0.9□□□□□ -2.27
SPG11Q96JI7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.9□□□□□ -2.27
SPG11Q96JI7 SNORD121B-201ENST00000458838 81 ntBASIC0.9□□□□□ -2.27
SPG11Q96JI7 MIR514B-201ENST00000516774 80 ntBASIC0.9□□□□□ -2.27
SPG11Q96JI7 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.9□□□□□ -2.27
SPG11Q96JI7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.9□□□□□ -2.27
SPG11Q96JI7 RNU6-43P-201ENST00000384302 107 ntBASIC0.89□□□□□ -2.27
SPG11Q96JI7 RNU1-101P-201ENST00000391171 127 ntBASIC0.89□□□□□ -2.27
SPG11Q96JI7 AC074117.2-201ENST00000417130 397 ntBASIC0.89□□□□□ -2.27
SPG11Q96JI7 AC099336.2-201ENST00000422457 254 ntBASIC0.89□□□□□ -2.27
SPG11Q96JI7 HMGB1P9-201ENST00000429856 646 ntBASIC0.89□□□□□ -2.27
SPG11Q96JI7 AL121601.2-201ENST00000438019 707 ntBASIC0.89□□□□□ -2.27
SPG11Q96JI7 AL161651.1-201ENST00000440882 223 ntBASIC0.89□□□□□ -2.27
SPG11Q96JI7 AP005597.4-201ENST00000526762 229 ntBASIC0.89□□□□□ -2.27
SPG11Q96JI7 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.89□□□□□ -2.27
SPG11Q96JI7 CD24P2-201ENST00000565486 219 ntBASIC0.89□□□□□ -2.27
SPG11Q96JI7 AC068338.1-201ENST00000565567 176 ntBASIC0.89□□□□□ -2.27
SPG11Q96JI7 MTCO3P24-201ENST00000572729 782 ntBASIC0.89□□□□□ -2.27
SPG11Q96JI7 AC067863.3-201ENST00000624172 122 ntBASIC0.89□□□□□ -2.27
SPG11Q96JI7 AP000648.3-201ENST00000623539 4507 ntBASIC0.89□□□□□ -2.27
SPG11Q96JI7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC0.89□□□□□ -2.27
SPG11Q96JI7 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SPG11Q96JI7 AP000949.1-201ENST00000438328 629 ntBASIC0.89□□□□□ -2.27
SPG11Q96JI7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.89□□□□□ -2.27
SPG11Q96JI7 MTND4LP3-201ENST00000468320 276 ntBASIC0.89□□□□□ -2.27
SPG11Q96JI7 AC092451.1-201ENST00000480211 153 ntBASIC0.89□□□□□ -2.27
SPG11Q96JI7 AC114322.1-201ENST00000506771 926 ntBASIC0.89□□□□□ -2.27
SPG11Q96JI7 AC113155.1-201ENST00000511141 769 ntBASIC0.89□□□□□ -2.27
SPG11Q96JI7 SNORA31.20-201ENST00000517111 133 ntBASIC0.89□□□□□ -2.27
SPG11Q96JI7 AL512605.2-201ENST00000592972 256 ntBASIC0.89□□□□□ -2.27
SPG11Q96JI7 AC009229.3-201ENST00000608056 282 ntBASIC0.89□□□□□ -2.27
SPG11Q96JI7 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SPG11Q96JI7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
SPG11Q96JI7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.88□□□□□ -2.27
SPG11Q96JI7 PGBD4P3-201ENST00000440731 581 ntBASIC0.88□□□□□ -2.27
SPG11Q96JI7 HSFY3P-201ENST00000444242 1191 ntBASIC0.88□□□□□ -2.27
SPG11Q96JI7 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC0.88□□□□□ -2.27
SPG11Q96JI7 RPS15AP34-201ENST00000487776 387 ntBASIC0.88□□□□□ -2.27
SPG11Q96JI7 MTCYBP35-201ENST00000503630 1137 ntBASIC0.88□□□□□ -2.27
SPG11Q96JI7 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
SPG11Q96JI7 HSPE1P14-201ENST00000605812 302 ntBASIC0.88□□□□□ -2.27
SPG11Q96JI7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
SPG11Q96JI7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC0.88□□□□□ -2.27
SPG11Q96JI7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
SPG11Q96JI7 MFSD8-213ENST00000641134 1327 ntBASIC0.88□□□□□ -2.27
SPG11Q96JI7 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.88□□□□□ -2.27
SPG11Q96JI7 HSPE1P1-201ENST00000421494 318 ntBASIC0.88□□□□□ -2.27
SPG11Q96JI7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC0.88□□□□□ -2.27
SPG11Q96JI7 UBE2V2P1-201ENST00000434717 398 ntBASIC0.88□□□□□ -2.27
SPG11Q96JI7 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms