Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AC099654.14-201ENST00000638599 341 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 PWAR6-201ENST00000552334 4618 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
ATP2A3Q93084 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.82□□□□□ -1.8
ATP2A3Q93084 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATP2A3Q93084 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ATP2A3Q93084 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATP2A3Q93084 AC073073.2-201ENST00000609827 2578 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 MTND5P1-201ENST00000445440 1375 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
ATP2A3Q93084 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ATP2A3Q93084 Y_RNA.70-201ENST00000362886 110 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ATP2A3Q93084 SNORA20.2-201ENST00000383922 131 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 RPS3AP24-201ENST00000407896 734 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 RNU4-55P-201ENST00000410731 137 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 RNU2-62P-201ENST00000410868 191 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 RNU6-516P-201ENST00000411381 104 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.81□□□□□ -1.8
ATP2A3Q93084 ELOCP4-201ENST00000420090 333 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.81□□□□□ -1.8
ATP2A3Q93084 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.81□□□□□ -1.8
ATP2A3Q93084 CYCSP4-201ENST00000429682 331 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 AC073464.1-201ENST00000429823 534 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 OR4K11P-201ENST00000431829 904 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 AC000111.3-201ENST00000433478 193 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.81□□□□□ -1.8
ATP2A3Q93084 RPL35AP22-201ENST00000436855 335 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 AC093156.1-201ENST00000440382 670 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.81□□□□□ -1.8
ATP2A3Q93084 AL121871.1-201ENST00000443413 436 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.81□□□□□ -1.8
ATP2A3Q93084 RNU7-59P-201ENST00000459101 61 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.81□□□□□ -1.8
ATP2A3Q93084 AC007182.2-201ENST00000489251 402 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.81□□□□□ -1.8
ATP2A3Q93084 PRDX4P1-201ENST00000507189 574 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 AC074250.1-201ENST00000511117 192 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 AC114781.4-201ENST00000513707 639 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 RNU6-507P-201ENST00000516045 100 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.81□□□□□ -1.8
ATP2A3Q93084 RANP9-201ENST00000519957 271 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.81□□□□□ -1.8
ATP2A3Q93084 AL133271.1-201ENST00000538229 291 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.81□□□□□ -1.8
ATP2A3Q93084 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.81□□□□□ -1.8
ATP2A3Q93084 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
ATP2A3Q93084 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.81□□□□□ -1.8
ATP2A3Q93084 AC012443.1-201ENST00000605605 231 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 AL390240.1-201ENST00000612950 384 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 MIR8058-201ENST00000615737 89 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 MIR7975-201ENST00000619350 68 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 AP000553.6-201ENST00000641242 118 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 AC119674.1-207ENST00000641355 633 ntBASIC3.81□□□□□ -1.8
ATP2A3Q93084 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
ATP2A3Q93084 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
ATP2A3Q93084 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
ATP2A3Q93084 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.8□□□□□ -1.8
ATP2A3Q93084 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.8□□□□□ -1.8
ATP2A3Q93084 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.8□□□□□ -1.8
ATP2A3Q93084 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.8□□□□□ -1.8
ATP2A3Q93084 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
ATP2A3Q93084 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ATP2A3Q93084 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATP2A3Q93084 RNU6-1090P-201ENST00000364065 94 ntBASIC3.8□□□□□ -1.8
ATP2A3Q93084 RNU6-637P-201ENST00000384050 107 ntBASIC3.8□□□□□ -1.8
ATP2A3Q93084 RNU6-432P-201ENST00000384196 109 ntBASIC3.8□□□□□ -1.8
ATP2A3Q93084 Y_RNA.450-201ENST00000384198 113 ntBASIC3.8□□□□□ -1.8
ATP2A3Q93084 MTCO3P40-201ENST00000392516 676 ntBASIC3.8□□□□□ -1.8
ATP2A3Q93084 PTMAP5-201ENST00000393073 333 ntBASIC3.8□□□□□ -1.8
ATP2A3Q93084 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.8□□□□□ -1.8
ATP2A3Q93084 UBE2D3P2-201ENST00000424409 445 ntBASIC3.8□□□□□ -1.8
ATP2A3Q93084 AP000907.1-201ENST00000428428 510 ntBASIC3.8□□□□□ -1.8
ATP2A3Q93084 AL159987.2-201ENST00000432754 307 ntBASIC3.8□□□□□ -1.8
ATP2A3Q93084 AC073063.1-201ENST00000434352 607 ntBASIC3.8□□□□□ -1.8
ATP2A3Q93084 NDUFB1P1-201ENST00000435191 180 ntBASIC3.8□□□□□ -1.8
ATP2A3Q93084 AC092001.1-201ENST00000453012 261 ntBASIC3.8□□□□□ -1.8
ATP2A3Q93084 AC012181.1-201ENST00000479895 423 ntBASIC3.8□□□□□ -1.8
ATP2A3Q93084 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.8□□□□□ -1.8
ATP2A3Q93084 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.8□□□□□ -1.8
ATP2A3Q93084 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.8□□□□□ -1.8
ATP2A3Q93084 AP001804.3-201ENST00000525146 880 ntBASIC3.8□□□□□ -1.8
ATP2A3Q93084 AP000857.1-201ENST00000532151 543 ntBASIC3.8□□□□□ -1.8
ATP2A3Q93084 OR4T1P-201ENST00000554933 911 ntBASIC3.8□□□□□ -1.8
ATP2A3Q93084 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.8□□□□□ -1.8
ATP2A3Q93084 AL356055.1-201ENST00000602528 446 ntBASIC3.8□□□□□ -1.8
ATP2A3Q93084 AP000907.4-201ENST00000604143 237 ntBASIC3.8□□□□□ -1.8
ATP2A3Q93084 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.8□□□□□ -1.8
ATP2A3Q93084 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.8□□□□□ -1.8
ATP2A3Q93084 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.8□□□□□ -1.8
ATP2A3Q93084 AC245517.5-201ENST00000611529 162 ntBASIC3.8□□□□□ -1.8
ATP2A3Q93084 uc_338.12-201ENST00000616344 181 ntBASIC3.8□□□□□ -1.8
ATP2A3Q93084 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATP2A3Q93084 AC104985.2-201ENST00000620598 500 ntBASIC3.8□□□□□ -1.8
ATP2A3Q93084 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATP2A3Q93084 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
ATP2A3Q93084 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ATP2A3Q93084 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATP2A3Q93084 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATP2A3Q93084 AC073346.2-201ENST00000624724 2058 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms