Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC106707.2-201ENST00000484182 374 ntBASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 MLLT10P2-201ENST00000506434 249 ntBASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 RNA5SP337-201ENST00000517007 109 ntBASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 SNORA31.22-201ENST00000517204 135 ntBASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 AC125611.2-201ENST00000551907 647 ntBASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 FAM60BP-201ENST00000578364 658 ntBASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 AL606834.2-201ENST00000602954 668 ntBASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 AL022154.1-201ENST00000604698 785 ntBASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 AC008277.2-201ENST00000605196 797 ntBASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 AC069200.1-201ENST00000609511 323 ntBASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 AC110774.1-201ENST00000623567 2018 ntBASIC3.31□□□□□ -1.88
SLC44A1Q8WWI5 AC007256.1-201ENST00000392253 2765 ntBASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 Y_RNA.41-201ENST00000362646 102 ntBASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 RPS3AP36-201ENST00000398190 775 ntBASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 RPS29P4-201ENST00000414733 161 ntBASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 AC006946.1-201ENST00000429106 328 ntBASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 AC025518.1-201ENST00000479856 347 ntBASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 IGKV2D-19-201ENST00000523346 262 ntBASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 AC005951.1-201ENST00000576706 485 ntBASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 MIR4293-201ENST00000584305 78 ntBASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 AL021997.1-201ENST00000605757 193 ntBASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 AC013476.2-201ENST00000614456 459 ntBASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 AL355810.1-201ENST00000614629 552 ntBASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 AC073534.2-201ENST00000620377 381 ntBASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 AC099654.12-201ENST00000639868 649 ntBASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
SLC44A1Q8WWI5 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 AC005832.2-201ENST00000538921 1430 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 MTND4P5-201ENST00000435821 1374 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 OR1S2-201ENST00000302592 978 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 MIR208A-201ENST00000362287 71 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 RNU6-50P-201ENST00000362356 103 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 RNU4-35P-201ENST00000362588 141 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 RNU6-511P-201ENST00000363496 107 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 RN7SKP226-201ENST00000364912 300 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 DEFB109C-201ENST00000382575 264 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 DEFB109B-201ENST00000382656 264 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 MIR7-3-201ENST00000384898 110 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 Y_RNA.599-201ENST00000410489 109 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 RNU6-195P-201ENST00000411352 109 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 AC127391.1-201ENST00000411737 98 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 RPL32P35-201ENST00000415214 394 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms