Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS52Q8N1B4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS52Q8N1B4 AC007656.2-201ENST00000624902 4547 ntBASIC3.75□□□□□ -1.81
VPS52Q8N1B4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS52Q8N1B4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS52Q8N1B4 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
VPS52Q8N1B4 RNU6-223P-201ENST00000362830 107 ntBASIC3.75□□□□□ -1.81
VPS52Q8N1B4 RNU5E-8P-201ENST00000363502 116 ntBASIC3.75□□□□□ -1.81
VPS52Q8N1B4 RNA5SP235-201ENST00000365411 114 ntBASIC3.75□□□□□ -1.81
VPS52Q8N1B4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
VPS52Q8N1B4 MIR128-1-201ENST00000384921 82 ntBASIC3.75□□□□□ -1.81
VPS52Q8N1B4 GSTA9P-201ENST00000406231 611 ntBASIC3.75□□□□□ -1.81
VPS52Q8N1B4 RNU4-65P-201ENST00000410473 140 ntBASIC3.75□□□□□ -1.81
VPS52Q8N1B4 FCF1P9-201ENST00000412546 282 ntBASIC3.75□□□□□ -1.81
VPS52Q8N1B4 SSXP9-201ENST00000417503 292 ntBASIC3.75□□□□□ -1.81
VPS52Q8N1B4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS52Q8N1B4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS52Q8N1B4 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
VPS52Q8N1B4 RPL31P35-201ENST00000431058 377 ntBASIC3.75□□□□□ -1.81
VPS52Q8N1B4 AC090774.1-201ENST00000435925 246 ntBASIC3.75□□□□□ -1.81
VPS52Q8N1B4 AL662791.1-201ENST00000441992 928 ntBASIC3.75□□□□□ -1.81
VPS52Q8N1B4 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.75□□□□□ -1.81
VPS52Q8N1B4 C1DP4-201ENST00000455429 424 ntBASIC3.75□□□□□ -1.81
VPS52Q8N1B4 HMGN2P16-201ENST00000456802 261 ntBASIC3.75□□□□□ -1.81
VPS52Q8N1B4 AC093899.1-201ENST00000457984 376 ntBASIC3.75□□□□□ -1.81
VPS52Q8N1B4 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS52Q8N1B4 AC093663.1-201ENST00000497190 394 ntBASIC3.75□□□□□ -1.81
VPS52Q8N1B4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS52Q8N1B4 RN7SKP244-201ENST00000516513 307 ntBASIC3.75□□□□□ -1.81
VPS52Q8N1B4 RNU6-506P-201ENST00000516553 94 ntBASIC3.75□□□□□ -1.81
VPS52Q8N1B4 RN7SKP60-201ENST00000516985 239 ntBASIC3.75□□□□□ -1.81
VPS52Q8N1B4 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.75□□□□□ -1.81
VPS52Q8N1B4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS52Q8N1B4 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS52Q8N1B4 TPRKBP2-201ENST00000565969 475 ntBASIC3.75□□□□□ -1.81
VPS52Q8N1B4 AC107304.1-201ENST00000604229 296 ntBASIC3.75□□□□□ -1.81
VPS52Q8N1B4 MIR8057-201ENST00000620957 69 ntBASIC3.75□□□□□ -1.81
VPS52Q8N1B4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS52Q8N1B4 AC004925.1-201ENST00000624256 2706 ntBASIC3.75□□□□□ -1.81
VPS52Q8N1B4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS52Q8N1B4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.75□□□□□ -1.81
VPS52Q8N1B4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
VPS52Q8N1B4 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AC027514.1-201ENST00000588561 1603 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 FRG1CP-201ENST00000358464 769 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VPS52Q8N1B4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS52Q8N1B4 Y_RNA.111-201ENST00000363248 100 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 RNY3P13-201ENST00000365542 102 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS52Q8N1B4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS52Q8N1B4 RNU6-1074P-201ENST00000383995 104 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 RNU6-432P-201ENST00000384196 109 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AL109755.1-201ENST00000401791 649 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 RNU2-62P-201ENST00000410868 191 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AC127391.1-201ENST00000411737 98 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AC096664.2-201ENST00000411843 406 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AC133104.1-201ENST00000429100 218 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AL358934.1-201ENST00000432346 324 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 VDAC1P3-201ENST00000434069 851 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS52Q8N1B4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AC132479.1-201ENST00000449160 144 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS52Q8N1B4 ARL2BPP6-201ENST00000512757 439 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS52Q8N1B4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AC026801.2-201ENST00000515352 425 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 IGKV2-26-201ENST00000518305 343 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS52Q8N1B4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AC022616.3-201ENST00000523940 148 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AL163153.1-201ENST00000554223 283 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS52Q8N1B4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AC106782.4-201ENST00000568264 210 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AC103710.2-201ENST00000609912 942 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AL590282.1-201ENST00000610379 1136 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AL133173.2-201ENST00000614270 90 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AL450472.3-201ENST00000615578 367 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 MIR7112-201ENST00000616126 65 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AL603758.1-201ENST00000618654 241 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 AC019226.1-201ENST00000625666 515 ntBASIC3.74□□□□□ -1.81
VPS52Q8N1B4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS52Q8N1B4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VPS52Q8N1B4 TAB3P1-202ENST00000452645 1634 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AC073073.2-201ENST00000609827 2578 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AC005832.2-201ENST00000538921 1430 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms