Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 LINC02210-201ENST00000444561 288 ntBASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 snoU13.3-201ENST00000459441 104 ntBASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 AC073901.1-201ENST00000462471 408 ntBASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 ABCC13-202ENST00000463099 3842 ntBASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 RN7SL197P-201ENST00000466981 299 ntBASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 NIP7P2-201ENST00000485801 544 ntBASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 AL160314.1-201ENST00000490836 438 ntBASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 RNU5F-8P-201ENST00000515941 111 ntBASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 AC010928.2-201ENST00000588017 287 ntBASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 PHKBP1-201ENST00000450951 1951 ntBASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 AC092681.1-201ENST00000297369 291 ntBASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 MIR410-201ENST00000362222 80 ntBASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 RNU6-215P-201ENST00000365169 102 ntBASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 RNU6-17P-201ENST00000384245 107 ntBASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 RNU6-18P-201ENST00000384527 107 ntBASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 OR2AT2P-201ENST00000413438 905 ntBASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 AL627311.1-201ENST00000431514 115 ntBASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 AC009296.1-201ENST00000443146 155 ntBASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 EEF1B2P6-201ENST00000445713 673 ntBASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 RPS4XP1-201ENST00000482189 787 ntBASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 RNU6-377P-201ENST00000515965 102 ntBASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 AP005660.1-201ENST00000522972 293 ntBASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 RPL21P9-201ENST00000556149 474 ntBASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 AC002545.1-201ENST00000592511 181 ntBASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 AC234771.5-201ENST00000600161 514 ntBASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 MIR6862-1-201ENST00000613016 70 ntBASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 MIR6862-2-201ENST00000614755 70 ntBASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 AC025574.2-201ENST00000615621 514 ntBASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 AC131238.1-201ENST00000617135 328 ntBASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 IGHVIII-44-202ENST00000636235 289 ntBASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 AC009962.1-201ENST00000567327 3813 ntBASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 AC135776.4-201ENST00000624300 1904 ntBASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 AC233981.2-201ENST00000611524 1614 ntBASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC116Q8IYX3 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 RNU6-449P-201ENST00000383914 107 ntBASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 Y_RNA.446-201ENST00000384178 104 ntBASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 SNORA46.1-201ENST00000391069 153 ntBASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 LAP3P1-201ENST00000403648 294 ntBASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 SNORD12B-201ENST00000410433 91 ntBASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 AC007161.1-204ENST00000423039 460 ntBASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 OOSP1P1-201ENST00000423265 274 ntBASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 HMGN2P27-201ENST00000427352 270 ntBASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 AP000907.1-201ENST00000428428 510 ntBASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 CYCSP6-201ENST00000434498 302 ntBASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 RPL36AP39-201ENST00000445859 318 ntBASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 UQCRBP2-201ENST00000447827 297 ntBASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 SSXP4-201ENST00000451349 245 ntBASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 AZGP1P2-201ENST00000454506 345 ntBASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 RN7SL214P-201ENST00000487317 265 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms