Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 MIR4506-201ENST00000584693 77 ntBASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 AL022161.1-201ENST00000604390 213 ntBASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 AC004067.1-201ENST00000608733 700 ntBASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 MIR6130-201ENST00000619419 109 ntBASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 AC009268.2-201ENST00000621925 457 ntBASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 AC068057.2-201ENST00000624047 895 ntBASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 MTND5P33-201ENST00000571250 1450 ntBASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 AC092593.1-201ENST00000515413 1815 ntBASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 AC062016.1-201ENST00000355719 319 ntBASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 AL360182.1-201ENST00000397433 468 ntBASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 AC090960.1-201ENST00000421072 306 ntBASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 AL139281.1-201ENST00000422120 335 ntBASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 AC233728.2-201ENST00000425348 757 ntBASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 MTATP6P4-201ENST00000427725 675 ntBASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 AC090774.1-201ENST00000435925 246 ntBASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 RPL26P6-201ENST00000440913 438 ntBASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 TRIM60P18-201ENST00000441518 828 ntBASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 BMI1P1-201ENST00000445879 941 ntBASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 AL592447.1-201ENST00000447592 540 ntBASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 RPS27AP8-201ENST00000452665 445 ntBASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 MTND1P9-201ENST00000453775 944 ntBASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 RPL21P8-201ENST00000465083 535 ntBASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 RNA5SP385-201ENST00000515947 110 ntBASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 AP000907.2-201ENST00000530827 353 ntBASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 HMGB1P6-201ENST00000569046 646 ntBASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 AC105129.3-201ENST00000605455 485 ntBASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 AC007619.2-201ENST00000605743 379 ntBASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 AC027807.2-201ENST00000616099 408 ntBASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 GABRG2-229ENST00000641017 3628 ntBASIC3.12□□□□□ -1.91
CCDC60Q8IWA6 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 AC005832.2-201ENST00000538921 1430 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 AC010733.2-201ENST00000589496 5702 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 MTND5P19-201ENST00000424872 1794 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 RNU5E-8P-201ENST00000363502 116 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 RNU6-533P-201ENST00000384144 107 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 RNU6-432P-201ENST00000384196 109 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 SNORA26.8-201ENST00000391306 124 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 SAR1AP2-201ENST00000392696 594 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 AL138827.1-201ENST00000402666 306 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 NPM1P11-201ENST00000417106 855 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 RPL21P32-201ENST00000419877 477 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 NUP35P1-201ENST00000422734 947 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 AC109583.1-201ENST00000432156 268 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 RPL22P17-201ENST00000438729 315 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 AC118469.1-201ENST00000442943 488 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 RNA5SP310-201ENST00000459084 116 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 AP000797.1-201ENST00000478870 387 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 AC109486.1-201ENST00000486833 374 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 AC109464.2-201ENST00000510242 943 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 AC010265.1-201ENST00000513509 211 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 RPL12P50-201ENST00000603116 116 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 U73023.1-201ENST00000603134 700 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 OR10AB1P-201ENST00000609613 938 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 AC012150.2-201ENST00000621300 544 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 AC019226.1-201ENST00000625666 515 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.11□□□□□ -1.91
CCDC60Q8IWA6 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 SNORA51.4-201ENST00000364993 124 ntBASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 RNU6-76P-201ENST00000384060 104 ntBASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 RPS20P2-201ENST00000402520 389 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms