Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AL110115.1-201ENST00000614396 364 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 AC010338.1-201ENST00000621823 717 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 AC007998.5-201ENST00000622938 237 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CTR9Q6PD62 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CTR9Q6PD62 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CTR9Q6PD62 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CTR9Q6PD62 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CTR9Q6PD62 AC062016.1-201ENST00000355719 319 ntBASIC3.28□□□□□ -1.88
CTR9Q6PD62 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
CTR9Q6PD62 RNU2-52P-201ENST00000410680 190 ntBASIC3.28□□□□□ -1.88
CTR9Q6PD62 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.28□□□□□ -1.88
CTR9Q6PD62 HMGB1P11-201ENST00000413899 637 ntBASIC3.28□□□□□ -1.88
CTR9Q6PD62 AL451074.5-201ENST00000415894 435 ntBASIC3.28□□□□□ -1.88
CTR9Q6PD62 AL137014.1-201ENST00000420490 1226 ntBASIC3.28□□□□□ -1.88
CTR9Q6PD62 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.28□□□□□ -1.88
CTR9Q6PD62 MTCO1P39-201ENST00000426148 480 ntBASIC3.28□□□□□ -1.88
CTR9Q6PD62 RPL36AP6-201ENST00000435770 321 ntBASIC3.28□□□□□ -1.88
CTR9Q6PD62 LARP1BP3-201ENST00000437229 869 ntBASIC3.28□□□□□ -1.88
CTR9Q6PD62 AL513043.1-201ENST00000439124 535 ntBASIC3.28□□□□□ -1.88
CTR9Q6PD62 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.28□□□□□ -1.88
CTR9Q6PD62 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.28□□□□□ -1.88
CTR9Q6PD62 SETP11-201ENST00000473027 690 ntBASIC3.28□□□□□ -1.88
CTR9Q6PD62 AC106872.3-201ENST00000495104 446 ntBASIC3.28□□□□□ -1.88
CTR9Q6PD62 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.28□□□□□ -1.88
CTR9Q6PD62 RNU6-528P-201ENST00000516926 100 ntBASIC3.28□□□□□ -1.88
CTR9Q6PD62 AC013828.2-201ENST00000532487 235 ntBASIC3.28□□□□□ -1.88
CTR9Q6PD62 AC068587.4-201ENST00000533893 186 ntBASIC3.28□□□□□ -1.88
CTR9Q6PD62 AP001004.1-201ENST00000582468 324 ntBASIC3.28□□□□□ -1.88
CTR9Q6PD62 BNIP3P23-201ENST00000599655 511 ntBASIC3.28□□□□□ -1.88
CTR9Q6PD62 WISP1-OT1-201ENST00000602893 642 ntBASIC3.28□□□□□ -1.88
CTR9Q6PD62 AC013444.2-201ENST00000603317 787 ntBASIC3.28□□□□□ -1.88
CTR9Q6PD62 MTCYBP22-201ENST00000603788 447 ntBASIC3.28□□□□□ -1.88
CTR9Q6PD62 SNHG22-203ENST00000617833 660 ntBASIC3.28□□□□□ -1.88
CTR9Q6PD62 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.28□□□□□ -1.88
CTR9Q6PD62 AL356266.1-201ENST00000623311 483 ntBASIC3.28□□□□□ -1.88
CTR9Q6PD62 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.28□□□□□ -1.88
CTR9Q6PD62 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.28□□□□□ -1.88
CTR9Q6PD62 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CTR9Q6PD62 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CTR9Q6PD62 Y_RNA.97-201ENST00000363094 102 ntBASIC3.27□□□□□ -1.89
CTR9Q6PD62 RNU6-97P-201ENST00000363387 104 ntBASIC3.27□□□□□ -1.89
CTR9Q6PD62 Y_RNA.560-201ENST00000384689 102 ntBASIC3.27□□□□□ -1.89
CTR9Q6PD62 RNA5SP21-201ENST00000410917 96 ntBASIC3.27□□□□□ -1.89
CTR9Q6PD62 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.27□□□□□ -1.89
CTR9Q6PD62 BEND7P1-201ENST00000422058 457 ntBASIC3.27□□□□□ -1.89
CTR9Q6PD62 AC021382.1-201ENST00000483523 359 ntBASIC3.27□□□□□ -1.89
CTR9Q6PD62 RPL9P33-201ENST00000484311 566 ntBASIC3.27□□□□□ -1.89
CTR9Q6PD62 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.27□□□□□ -1.89
CTR9Q6PD62 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.27□□□□□ -1.89
CTR9Q6PD62 AC004062.1-201ENST00000509926 645 ntBASIC3.27□□□□□ -1.89
CTR9Q6PD62 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.27□□□□□ -1.89
CTR9Q6PD62 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.27□□□□□ -1.89
CTR9Q6PD62 AC087373.1-201ENST00000524920 491 ntBASIC3.27□□□□□ -1.89
CTR9Q6PD62 ELOCP31-201ENST00000540463 467 ntBASIC3.27□□□□□ -1.89
CTR9Q6PD62 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.27□□□□□ -1.89
CTR9Q6PD62 AC012435.1-202ENST00000568772 240 ntBASIC3.27□□□□□ -1.89
CTR9Q6PD62 MIR4672-201ENST00000583126 81 ntBASIC3.27□□□□□ -1.89
CTR9Q6PD62 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.27□□□□□ -1.89
CTR9Q6PD62 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.27□□□□□ -1.89
CTR9Q6PD62 UBE2L4-201ENST00000587688 464 ntBASIC3.27□□□□□ -1.89
CTR9Q6PD62 ZNF861P-201ENST00000588126 639 ntBASIC3.27□□□□□ -1.89
CTR9Q6PD62 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CTR9Q6PD62 AL360181.4-201ENST00000621752 134 ntBASIC3.27□□□□□ -1.89
CTR9Q6PD62 AL158801.5-201ENST00000623123 465 ntBASIC3.27□□□□□ -1.89
CTR9Q6PD62 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.27□□□□□ -1.89
CTR9Q6PD62 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTR9Q6PD62 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CTR9Q6PD62 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTR9Q6PD62 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CTR9Q6PD62 RNU6-853P-201ENST00000364306 107 ntBASIC3.26□□□□□ -1.89
CTR9Q6PD62 AL031577.2-201ENST00000404133 280 ntBASIC3.26□□□□□ -1.89
CTR9Q6PD62 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTR9Q6PD62 RNU6-920P-201ENST00000410926 92 ntBASIC3.26□□□□□ -1.89
CTR9Q6PD62 BX682237.1-201ENST00000415016 335 ntBASIC3.26□□□□□ -1.89
CTR9Q6PD62 NUP35P1-201ENST00000422734 947 ntBASIC3.26□□□□□ -1.89
CTR9Q6PD62 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.26□□□□□ -1.89
CTR9Q6PD62 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.26□□□□□ -1.89
CTR9Q6PD62 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.26□□□□□ -1.89
CTR9Q6PD62 SNORD109B-201ENST00000458961 67 ntBASIC3.26□□□□□ -1.89
CTR9Q6PD62 SNORD109A-201ENST00000459128 67 ntBASIC3.26□□□□□ -1.89
CTR9Q6PD62 AC090525.1-201ENST00000479116 478 ntBASIC3.26□□□□□ -1.89
CTR9Q6PD62 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.26□□□□□ -1.89
CTR9Q6PD62 AC022690.1-201ENST00000526681 550 ntBASIC3.26□□□□□ -1.89
CTR9Q6PD62 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.26□□□□□ -1.89
CTR9Q6PD62 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.26□□□□□ -1.89
CTR9Q6PD62 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.26□□□□□ -1.89
CTR9Q6PD62 AC109446.2-201ENST00000567872 497 ntBASIC3.26□□□□□ -1.89
CTR9Q6PD62 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.26□□□□□ -1.89
CTR9Q6PD62 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.26□□□□□ -1.89
CTR9Q6PD62 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.26□□□□□ -1.89
CTR9Q6PD62 MIR3915-201ENST00000578518 97 ntBASIC3.26□□□□□ -1.89
CTR9Q6PD62 AP000403.1-201ENST00000603349 851 ntBASIC3.26□□□□□ -1.89
CTR9Q6PD62 AC006023.1-201ENST00000603944 259 ntBASIC3.26□□□□□ -1.89
CTR9Q6PD62 AC007619.2-201ENST00000605743 379 ntBASIC3.26□□□□□ -1.89
CTR9Q6PD62 TUG1_1.1-201ENST00000610654 145 ntBASIC3.26□□□□□ -1.89
CTR9Q6PD62 MIR7844-201ENST00000616161 122 ntBASIC3.26□□□□□ -1.89
CTR9Q6PD62 AC078883.4-201ENST00000623218 367 ntBASIC3.26□□□□□ -1.89
CTR9Q6PD62 AF246928.1-201ENST00000623768 87 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms