Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC006504.3-201ENST00000586818 523 ntBASIC2.9□□□□□ -1.95
RFWD3Q6PCD5 ELOCP29-201ENST00000588193 334 ntBASIC2.9□□□□□ -1.95
RFWD3Q6PCD5 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RFWD3Q6PCD5 AP000403.1-201ENST00000603349 851 ntBASIC2.9□□□□□ -1.95
RFWD3Q6PCD5 AC011451.2-201ENST00000604303 598 ntBASIC2.9□□□□□ -1.95
RFWD3Q6PCD5 TUG1_1.1-201ENST00000610654 145 ntBASIC2.9□□□□□ -1.95
RFWD3Q6PCD5 AC095031.1-201ENST00000623685 672 ntBASIC2.9□□□□□ -1.95
RFWD3Q6PCD5 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
RFWD3Q6PCD5 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.9□□□□□ -1.95
RFWD3Q6PCD5 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 AC092593.1-201ENST00000515413 1815 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 RNU1-112P-201ENST00000364401 164 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 SNORA14A-201ENST00000364773 135 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 RNU6-1074P-201ENST00000383995 104 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 SNORD116-2-201ENST00000384274 95 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 Y_RNA.548-201ENST00000384656 105 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 SNORD116-6-201ENST00000384711 96 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 BX119904.4-201ENST00000424402 301 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 AC079780.1-201ENST00000428259 207 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 AL365184.2-201ENST00000431139 435 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 LARP1BP3-201ENST00000437229 869 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 AC096751.1-202ENST00000502691 1067 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 RNA5SP356-201ENST00000515972 94 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 RNU6-528P-201ENST00000516926 100 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 AC090136.1-201ENST00000520009 240 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 AP003497.1-201ENST00000528472 562 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 MIR4307-201ENST00000582802 84 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 ATP1B3P1-201ENST00000605365 821 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 AC105129.3-201ENST00000605455 485 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 AC092354.1-201ENST00000606057 376 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 AC097065.2-201ENST00000608159 533 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 AL353748.2-201ENST00000622148 471 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 AC007998.5-201ENST00000622938 237 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.89□□□□□ -1.95
RFWD3Q6PCD5 AC012321.1-201ENST00000561622 1588 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 Y_RNA.97-201ENST00000363094 102 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 Y_RNA.510-201ENST00000384511 114 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 RPL21P75-201ENST00000396599 483 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 RPL21P28-201ENST00000401418 483 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 AL592114.1-201ENST00000403842 483 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 SSXP9-201ENST00000417503 292 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 RPL37P21-201ENST00000435890 276 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 RPL23AP58-201ENST00000440453 469 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 RPL7P36-201ENST00000444633 681 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 KATNBL1P6-201ENST00000453433 915 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 RPS29P12-201ENST00000460178 152 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 RPL21P39-201ENST00000463605 483 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 RPL21P93-201ENST00000480465 489 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 AC233702.1-201ENST00000482905 502 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 AC087190.1-201ENST00000484462 480 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 AC093591.1-201ENST00000491435 481 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 RPL21P16-201ENST00000495531 483 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 AC105914.1-201ENST00000511798 226 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 AC103783.1-201ENST00000520506 373 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 ELOCP31-201ENST00000540463 467 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 SETP2-201ENST00000553886 926 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 AC091489.2-201ENST00000566263 604 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 ROCK1P1-201ENST00000573767 549 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 AL359198.2-201ENST00000611836 194 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 MIR6852-201ENST00000621699 66 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
RFWD3Q6PCD5 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms