Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 RNU6-308P-201ENST00000390957 107 ntBASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 SNORD70.1-201ENST00000391007 85 ntBASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 AL138785.1-201ENST00000425821 331 ntBASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 AL121871.1-201ENST00000443413 436 ntBASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 GAPDHP27-201ENST00000447427 1020 ntBASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 AL591623.2-201ENST00000449978 222 ntBASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 AC010631.1-201ENST00000474150 156 ntBASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 AF213884.1-201ENST00000488102 463 ntBASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 AC108022.1-201ENST00000493466 478 ntBASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 AC097473.1-201ENST00000508142 408 ntBASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 SNORA14.1-201ENST00000516113 141 ntBASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 RNU6-1069P-201ENST00000516612 133 ntBASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 AC004817.2-201ENST00000561794 651 ntBASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 MIR5685-201ENST00000579080 79 ntBASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 AC006006.1-201ENST00000603082 144 ntBASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 AL606490.9-201ENST00000603331 271 ntBASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 AL670379.4-201ENST00000605279 254 ntBASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 AL359547.2-201ENST00000615810 418 ntBASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 AC093535.2-201ENST00000624769 2326 ntBASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 PCAT14-202ENST00000627127 3935 ntBASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 ASNSP1-201ENST00000518311 1939 ntBASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 AL592182.3-201ENST00000642132 3304 ntBASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 RNU6-310P-201ENST00000384655 107 ntBASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 AL583834.1-201ENST00000406943 343 ntBASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 SNORA74C-2-201ENST00000411179 201 ntBASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 AC092447.6-201ENST00000414578 210 ntBASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 AC018865.2-201ENST00000423631 129 ntBASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 RPL7P28-201ENST00000437739 740 ntBASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 AL500522.2-201ENST00000448562 343 ntBASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 AC116337.1-201ENST00000509680 687 ntBASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 CYCSP27-201ENST00000527643 293 ntBASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 RPL23AP97-201ENST00000568955 471 ntBASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 AC067852.4-201ENST00000590314 478 ntBASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 ATP5A1P2-202ENST00000616464 443 ntBASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 AL355365.1-201ENST00000616480 294 ntBASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 AL669831.3-213ENST00000636676 183 ntBASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 AP000542.2-201ENST00000623199 6179 ntBASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
USPL1Q5W0Q7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 AL049641.1-201ENST00000441055 1948 ntBASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 KPNA2P1-201ENST00000458289 1591 ntBASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 RNU6-1115P-201ENST00000362490 106 ntBASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 Y_RNA.148-201ENST00000363557 117 ntBASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 RNU6-1032P-201ENST00000384100 107 ntBASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 MIR200C-201ENST00000384980 68 ntBASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 RNU6-1106P-201ENST00000390845 107 ntBASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 RPS23P10-201ENST00000416185 486 ntBASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 FABP5P13-201ENST00000452144 328 ntBASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 BTF3P15-201ENST00000455606 336 ntBASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 RPL37P6-202ENST00000464216 403 ntBASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 RNU6-123P-201ENST00000516163 102 ntBASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 RNU6-352P-201ENST00000516908 107 ntBASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 FAM157A-202ENST00000615155 405 ntBASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 PLCE1P1-201ENST00000622094 305 ntBASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 AC243312.2-201ENST00000623340 601 ntBASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 AC007546.2-201ENST00000623996 360 ntBASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 AC022418.1-201ENST00000624118 445 ntBASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms