Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.72□□□□□ -2.29
UBR4Q5T4S7 AC012493.3-201ENST00000604494 112 ntBASIC0.72□□□□□ -2.29
UBR4Q5T4S7 AP006248.3-201ENST00000623580 594 ntBASIC0.72□□□□□ -2.29
UBR4Q5T4S7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
UBR4Q5T4S7 AL389895.1-201ENST00000554127 252 ntBASIC0.71□□□□□ -2.3
UBR4Q5T4S7 AP001180.3-201ENST00000582221 145 ntBASIC0.71□□□□□ -2.3
UBR4Q5T4S7 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC0.71□□□□□ -2.3
UBR4Q5T4S7 AL512605.2-201ENST00000592972 256 ntBASIC0.71□□□□□ -2.3
UBR4Q5T4S7 XIAPP1-201ENST00000603162 600 ntBASIC0.71□□□□□ -2.3
UBR4Q5T4S7 SNORA26.7-201ENST00000391288 122 ntBASIC0.71□□□□□ -2.3
UBR4Q5T4S7 AC091965.2-201ENST00000512324 613 ntBASIC0.71□□□□□ -2.3
UBR4Q5T4S7 RNU6-782P-201ENST00000516852 104 ntBASIC0.71□□□□□ -2.3
UBR4Q5T4S7 AP005639.2-201ENST00000527592 928 ntBASIC0.71□□□□□ -2.3
UBR4Q5T4S7 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC0.71□□□□□ -2.3
UBR4Q5T4S7 SNORD115-41-201ENST00000363608 82 ntBASIC0.71□□□□□ -2.3
UBR4Q5T4S7 MIR1304-201ENST00000408243 91 ntBASIC0.71□□□□□ -2.3
UBR4Q5T4S7 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.71□□□□□ -2.3
UBR4Q5T4S7 RNU6-889P-201ENST00000517189 103 ntBASIC0.71□□□□□ -2.3
UBR4Q5T4S7 AP004247.1-201ENST00000531556 1289 ntBASIC0.71□□□□□ -2.3
UBR4Q5T4S7 HMGB3P26-201ENST00000560051 582 ntBASIC0.71□□□□□ -2.3
UBR4Q5T4S7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC0.71□□□□□ -2.3
UBR4Q5T4S7 MTND5P7-201ENST00000413558 1798 ntBASIC0.71□□□□□ -2.3
UBR4Q5T4S7 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.71□□□□□ -2.3
UBR4Q5T4S7 MTND1P23-201ENST00000416931 372 ntBASIC0.71□□□□□ -2.3
UBR4Q5T4S7 SNRPEP10-201ENST00000420249 274 ntBASIC0.71□□□□□ -2.3
UBR4Q5T4S7 RPS27AP8-201ENST00000452665 445 ntBASIC0.71□□□□□ -2.3
UBR4Q5T4S7 PRELID3BP4-201ENST00000515476 571 ntBASIC0.71□□□□□ -2.3
UBR4Q5T4S7 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC0.71□□□□□ -2.3
UBR4Q5T4S7 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
UBR4Q5T4S7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.71□□□□□ -2.3
UBR4Q5T4S7 MIR4295-201ENST00000585286 85 ntBASIC0.71□□□□□ -2.3
UBR4Q5T4S7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.7□□□□□ -2.3
UBR4Q5T4S7 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC0.7□□□□□ -2.3
UBR4Q5T4S7 TPT1P14-201ENST00000448018 505 ntBASIC0.7□□□□□ -2.3
UBR4Q5T4S7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.7□□□□□ -2.3
UBR4Q5T4S7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.7□□□□□ -2.3
UBR4Q5T4S7 RPL22P13-201ENST00000493291 347 ntBASIC0.7□□□□□ -2.3
UBR4Q5T4S7 MTCYBP35-201ENST00000503630 1137 ntBASIC0.7□□□□□ -2.3
UBR4Q5T4S7 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC0.7□□□□□ -2.3
UBR4Q5T4S7 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.7□□□□□ -2.3
UBR4Q5T4S7 AC006499.2-201ENST00000513470 337 ntBASIC0.7□□□□□ -2.3
UBR4Q5T4S7 RNU6-1004P-201ENST00000516584 111 ntBASIC0.7□□□□□ -2.3
UBR4Q5T4S7 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
UBR4Q5T4S7 AP003327.1-201ENST00000529684 127 ntBASIC0.7□□□□□ -2.3
UBR4Q5T4S7 RPL31P63-201ENST00000422565 375 ntBASIC0.7□□□□□ -2.3
UBR4Q5T4S7 AC118469.1-201ENST00000442943 488 ntBASIC0.7□□□□□ -2.3
UBR4Q5T4S7 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
UBR4Q5T4S7 AC068338.1-201ENST00000565567 176 ntBASIC0.7□□□□□ -2.3
UBR4Q5T4S7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC0.7□□□□□ -2.3
UBR4Q5T4S7 MIR365A-201ENST00000362260 87 ntBASIC0.7□□□□□ -2.3
UBR4Q5T4S7 RNU6-17P-201ENST00000384245 107 ntBASIC0.7□□□□□ -2.3
UBR4Q5T4S7 RNU6-18P-201ENST00000384527 107 ntBASIC0.7□□□□□ -2.3
UBR4Q5T4S7 BTBD10P2-201ENST00000404779 676 ntBASIC0.7□□□□□ -2.3
UBR4Q5T4S7 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.7□□□□□ -2.3
UBR4Q5T4S7 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC0.7□□□□□ -2.3
UBR4Q5T4S7 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.7□□□□□ -2.3
UBR4Q5T4S7 AC004383.1-201ENST00000438135 289 ntBASIC0.7□□□□□ -2.3
UBR4Q5T4S7 AC067942.3-201ENST00000512025 362 ntBASIC0.7□□□□□ -2.3
UBR4Q5T4S7 MIR4714-201ENST00000580728 77 ntBASIC0.7□□□□□ -2.3
UBR4Q5T4S7 AC138649.5-201ENST00000637456 137 ntBASIC0.7□□□□□ -2.3
UBR4Q5T4S7 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC0.7□□□□□ -2.3
UBR4Q5T4S7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.7□□□□□ -2.3
UBR4Q5T4S7 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
UBR4Q5T4S7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC0.7□□□□□ -2.3
UBR4Q5T4S7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
UBR4Q5T4S7 HAUS6P2-201ENST00000433254 2404 ntBASIC0.7□□□□□ -2.3
UBR4Q5T4S7 RNU1-148P-201ENST00000384472 162 ntBASIC0.69□□□□□ -2.3
UBR4Q5T4S7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.69□□□□□ -2.3
UBR4Q5T4S7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC0.69□□□□□ -2.3
UBR4Q5T4S7 EIF2S2P4-201ENST00000461070 984 ntBASIC0.69□□□□□ -2.3
UBR4Q5T4S7 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.69□□□□□ -2.3
UBR4Q5T4S7 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
UBR4Q5T4S7 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.69□□□□□ -2.3
UBR4Q5T4S7 Y_RNA.117-201ENST00000363294 101 ntBASIC0.69□□□□□ -2.3
UBR4Q5T4S7 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC0.69□□□□□ -2.3
UBR4Q5T4S7 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC0.69□□□□□ -2.3
UBR4Q5T4S7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC0.69□□□□□ -2.3
UBR4Q5T4S7 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC0.69□□□□□ -2.3
UBR4Q5T4S7 MTND5P10-201ENST00000603719 1809 ntBASIC0.69□□□□□ -2.3
UBR4Q5T4S7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
UBR4Q5T4S7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
UBR4Q5T4S7 RNA5SP511-201ENST00000410487 115 ntBASIC0.69□□□□□ -2.3
UBR4Q5T4S7 AC009961.3-201ENST00000449832 765 ntBASIC0.69□□□□□ -2.3
UBR4Q5T4S7 SNORD121B-201ENST00000458838 81 ntBASIC0.69□□□□□ -2.3
UBR4Q5T4S7 NAP1L1P3-201ENST00000462291 880 ntBASIC0.69□□□□□ -2.3
UBR4Q5T4S7 AL845331.3-202ENST00000562856 261 ntBASIC0.69□□□□□ -2.3
UBR4Q5T4S7 RNU6-1235P-201ENST00000384559 107 ntBASIC0.69□□□□□ -2.3
UBR4Q5T4S7 MIR3074-201ENST00000384885 81 ntBASIC0.69□□□□□ -2.3
UBR4Q5T4S7 NUP35P2-201ENST00000416748 943 ntBASIC0.69□□□□□ -2.3
UBR4Q5T4S7 RSL24D1P2-201ENST00000445584 366 ntBASIC0.69□□□□□ -2.3
UBR4Q5T4S7 RPL34P26-201ENST00000445636 354 ntBASIC0.69□□□□□ -2.3
UBR4Q5T4S7 RNU6-498P-201ENST00000459468 107 ntBASIC0.69□□□□□ -2.3
UBR4Q5T4S7 AC093852.1-201ENST00000503587 266 ntBASIC0.69□□□□□ -2.3
UBR4Q5T4S7 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.69□□□□□ -2.3
UBR4Q5T4S7 AC073413.2-201ENST00000604332 360 ntBASIC0.69□□□□□ -2.3
UBR4Q5T4S7 AC107294.3-201ENST00000609211 526 ntBASIC0.69□□□□□ -2.3
UBR4Q5T4S7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.69□□□□□ -2.3
UBR4Q5T4S7 AC068831.7-201ENST00000616954 363 ntBASIC0.69□□□□□ -2.3
UBR4Q5T4S7 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
UBR4Q5T4S7 EXTL2P1-201ENST00000446218 416 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms