Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SNORA8.3-201ENST00000384679 139 ntBASIC6.09□□□□□ -1.43
VARS2Q5ST30 AL451062.2-201ENST00000427515 271 ntBASIC6.09□□□□□ -1.43
VARS2Q5ST30 AL445687.1-201ENST00000439946 251 ntBASIC6.09□□□□□ -1.43
VARS2Q5ST30 AC004386.2-201ENST00000441858 148 ntBASIC6.09□□□□□ -1.43
VARS2Q5ST30 RPL7AP61-201ENST00000443410 636 ntBASIC6.09□□□□□ -1.43
VARS2Q5ST30 AC104164.2-201ENST00000496953 495 ntBASIC6.09□□□□□ -1.43
VARS2Q5ST30 RNU6ATAC17P-201ENST00000516074 71 ntBASIC6.09□□□□□ -1.43
VARS2Q5ST30 RNA5SP395-201ENST00000516567 118 ntBASIC6.09□□□□□ -1.43
VARS2Q5ST30 AC116158.1-201ENST00000560231 2129 ntBASIC6.09□□□□□ -1.43
VARS2Q5ST30 AC015720.1-201ENST00000565251 277 ntBASIC6.09□□□□□ -1.43
VARS2Q5ST30 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.09□□□□□ -1.43
VARS2Q5ST30 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.09□□□□□ -1.43
VARS2Q5ST30 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.09□□□□□ -1.43
VARS2Q5ST30 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.09□□□□□ -1.43
VARS2Q5ST30 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
VARS2Q5ST30 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VARS2Q5ST30 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.44
VARS2Q5ST30 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
VARS2Q5ST30 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
VARS2Q5ST30 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.09□□□□□ -1.44
VARS2Q5ST30 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.09□□□□□ -1.44
VARS2Q5ST30 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
VARS2Q5ST30 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.09□□□□□ -1.44
VARS2Q5ST30 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.08□□□□□ -1.44
VARS2Q5ST30 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VARS2Q5ST30 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.08□□□□□ -1.44
VARS2Q5ST30 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.08□□□□□ -1.44
VARS2Q5ST30 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
VARS2Q5ST30 AP001284.1-201ENST00000528393 2118 ntBASIC6.08□□□□□ -1.44
VARS2Q5ST30 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VARS2Q5ST30 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VARS2Q5ST30 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
VARS2Q5ST30 CENPCP1-201ENST00000533085 2578 ntBASIC6.08□□□□□ -1.44
VARS2Q5ST30 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.08□□□□□ -1.44
VARS2Q5ST30 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.08□□□□□ -1.44
VARS2Q5ST30 Y_RNA.101-201ENST00000363154 102 ntBASIC6.08□□□□□ -1.44
VARS2Q5ST30 Y_RNA.328-201ENST00000365208 113 ntBASIC6.08□□□□□ -1.44
VARS2Q5ST30 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.08□□□□□ -1.44
VARS2Q5ST30 MIR488-201ENST00000365739 83 ntBASIC6.08□□□□□ -1.44
VARS2Q5ST30 Y_RNA.521-201ENST00000384560 114 ntBASIC6.08□□□□□ -1.44
VARS2Q5ST30 MIR450A2-201ENST00000385022 100 ntBASIC6.08□□□□□ -1.44
VARS2Q5ST30 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
VARS2Q5ST30 AL645927.1-201ENST00000396783 406 ntBASIC6.08□□□□□ -1.44
VARS2Q5ST30 RNU6ATAC19P-201ENST00000408096 110 ntBASIC6.08□□□□□ -1.44
VARS2Q5ST30 RNA5SP225-201ENST00000410874 135 ntBASIC6.08□□□□□ -1.44
VARS2Q5ST30 RPL30P3-201ENST00000424262 333 ntBASIC6.08□□□□□ -1.44
VARS2Q5ST30 MRPS21P2-201ENST00000424704 264 ntBASIC6.08□□□□□ -1.44
VARS2Q5ST30 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.08□□□□□ -1.44
VARS2Q5ST30 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC6.08□□□□□ -1.44
VARS2Q5ST30 AL592045.1-201ENST00000429867 352 ntBASIC6.08□□□□□ -1.44
VARS2Q5ST30 Y_RNA.649-201ENST00000459077 103 ntBASIC6.08□□□□□ -1.44
VARS2Q5ST30 RN7SL727P-201ENST00000482164 296 ntBASIC6.08□□□□□ -1.44
VARS2Q5ST30 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.08□□□□□ -1.44
VARS2Q5ST30 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.08□□□□□ -1.44
VARS2Q5ST30 Y_RNA.692-201ENST00000516627 105 ntBASIC6.08□□□□□ -1.44
VARS2Q5ST30 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.08□□□□□ -1.44
VARS2Q5ST30 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.08□□□□□ -1.44
VARS2Q5ST30 IMMP1LP3-201ENST00000604197 224 ntBASIC6.08□□□□□ -1.44
VARS2Q5ST30 AL391903.3-201ENST00000612158 163 ntBASIC6.08□□□□□ -1.44
VARS2Q5ST30 AC090607.5-201ENST00000615692 224 ntBASIC6.08□□□□□ -1.44
VARS2Q5ST30 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
VARS2Q5ST30 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VARS2Q5ST30 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
VARS2Q5ST30 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VARS2Q5ST30 AC005224.3-201ENST00000584683 2140 ntBASIC6.08□□□□□ -1.44
VARS2Q5ST30 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VARS2Q5ST30 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.08□□□□□ -1.44
VARS2Q5ST30 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VARS2Q5ST30 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VARS2Q5ST30 AC068700.1-201ENST00000565862 3754 ntBASIC6.08□□□□□ -1.44
VARS2Q5ST30 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
VARS2Q5ST30 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VARS2Q5ST30 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.07□□□□□ -1.44
VARS2Q5ST30 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
VARS2Q5ST30 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
VARS2Q5ST30 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VARS2Q5ST30 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.07□□□□□ -1.44
VARS2Q5ST30 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
VARS2Q5ST30 RNA5SP391-201ENST00000363456 119 ntBASIC6.07□□□□□ -1.44
VARS2Q5ST30 RNA5SP30-201ENST00000365552 115 ntBASIC6.07□□□□□ -1.44
VARS2Q5ST30 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
VARS2Q5ST30 RNU6-541P-201ENST00000384709 110 ntBASIC6.07□□□□□ -1.44
VARS2Q5ST30 RPL23AP17-201ENST00000401064 499 ntBASIC6.07□□□□□ -1.44
VARS2Q5ST30 HLFP1-201ENST00000402375 499 ntBASIC6.07□□□□□ -1.44
VARS2Q5ST30 RNU6-1199P-201ENST00000411249 104 ntBASIC6.07□□□□□ -1.44
VARS2Q5ST30 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.07□□□□□ -1.44
VARS2Q5ST30 AC006028.1-201ENST00000438379 402 ntBASIC6.07□□□□□ -1.44
VARS2Q5ST30 snoU109.4-201ENST00000458953 143 ntBASIC6.07□□□□□ -1.44
VARS2Q5ST30 BTF3L4P4-201ENST00000506381 449 ntBASIC6.07□□□□□ -1.44
VARS2Q5ST30 TOMM22P4-201ENST00000511318 336 ntBASIC6.07□□□□□ -1.44
VARS2Q5ST30 RN7SKP122-201ENST00000515923 296 ntBASIC6.07□□□□□ -1.44
VARS2Q5ST30 SNORA40.13-201ENST00000516379 120 ntBASIC6.07□□□□□ -1.44
VARS2Q5ST30 AC126615.2-201ENST00000553003 515 ntBASIC6.07□□□□□ -1.44
VARS2Q5ST30 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.07□□□□□ -1.44
VARS2Q5ST30 NF1P5-201ENST00000588287 448 ntBASIC6.07□□□□□ -1.44
VARS2Q5ST30 AL590392.1-201ENST00000604960 446 ntBASIC6.07□□□□□ -1.44
VARS2Q5ST30 AC083809.1-201ENST00000615051 472 ntBASIC6.07□□□□□ -1.44
VARS2Q5ST30 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC6.07□□□□□ -1.44
VARS2Q5ST30 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC6.07□□□□□ -1.44
VARS2Q5ST30 AC109446.4-201ENST00000623235 2755 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms