Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 MED28P6-201ENST00000558776 231 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.49□□□□□ -1.85
USP41Q3LFD5 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.49□□□□□ -1.85
USP41Q3LFD5 DUXAP4-201ENST00000603046 613 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.49□□□□□ -1.85
USP41Q3LFD5 TUG1_2.1-201ENST00000614234 87 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.49□□□□□ -1.85
USP41Q3LFD5 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
USP41Q3LFD5 XIST_intron.1-201ENST00000619444 68 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 SNORD39.4-201ENST00000620099 78 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 AC095031.1-201ENST00000623685 672 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 PISRT1-201ENST00000626175 531 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 AC092326.2-201ENST00000624772 1561 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.49□□□□□ -1.85
USP41Q3LFD5 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
USP41Q3LFD5 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 AL355596.1-201ENST00000565399 3996 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
USP41Q3LFD5 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
USP41Q3LFD5 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
USP41Q3LFD5 MIR422A-201ENST00000362286 90 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 RNU5E-1-201ENST00000362477 120 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 RNU6-223P-201ENST00000362830 107 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 RNU6-1042P-201ENST00000384204 107 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
USP41Q3LFD5 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.48□□□□□ -1.85
USP41Q3LFD5 RNA5SP129-201ENST00000410276 118 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 RNU2-16P-201ENST00000410712 136 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 RNU2-8P-201ENST00000410727 190 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 AC127391.1-201ENST00000411737 98 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 BX295541.1-201ENST00000417774 250 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.48□□□□□ -1.85
USP41Q3LFD5 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.48□□□□□ -1.85
USP41Q3LFD5 MTCO3P5-201ENST00000433620 714 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 AC009961.2-201ENST00000435771 251 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 ARPC3P1-201ENST00000437218 533 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 RABEPKP1-201ENST00000440529 1026 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.48□□□□□ -1.85
USP41Q3LFD5 AC125238.1-201ENST00000448842 249 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.48□□□□□ -1.85
USP41Q3LFD5 HMGN2P16-201ENST00000456802 261 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 RN7SL863P-201ENST00000462370 296 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
USP41Q3LFD5 RPS4XP22-201ENST00000480755 780 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
USP41Q3LFD5 MTCO2P32-201ENST00000514865 403 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.48□□□□□ -1.85
USP41Q3LFD5 SNORA31.8-201ENST00000516327 108 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 RNA5SP380-201ENST00000517190 98 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 SNORA31.22-201ENST00000517204 135 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 RNU6-840P-201ENST00000517275 65 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.48□□□□□ -1.85
USP41Q3LFD5 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.48□□□□□ -1.85
USP41Q3LFD5 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.48□□□□□ -1.85
USP41Q3LFD5 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.48□□□□□ -1.85
USP41Q3LFD5 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.48□□□□□ -1.85
USP41Q3LFD5 AF038458.1-201ENST00000588406 262 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 AC091805.2-201ENST00000603848 235 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 AC008277.2-201ENST00000605196 797 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 AC103710.1-201ENST00000610003 901 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 AC109347.2-201ENST00000610220 349 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 AL133173.2-201ENST00000614270 90 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
USP41Q3LFD5 AC099842.1-201ENST00000619919 596 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 AC110801.1-201ENST00000623590 212 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
USP41Q3LFD5 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
USP41Q3LFD5 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
USP41Q3LFD5 AL021368.2-201ENST00000606125 5352 ntBASIC3.48□□□□□ -1.85
USP41Q3LFD5 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
USP41Q3LFD5 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
USP41Q3LFD5 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
USP41Q3LFD5 OR1S2-201ENST00000302592 978 ntBASIC3.47□□□□□ -1.85
USP41Q3LFD5 RPL23AP32-201ENST00000395315 459 ntBASIC3.47□□□□□ -1.85
USP41Q3LFD5 RNU2-62P-201ENST00000410868 191 ntBASIC3.47□□□□□ -1.85
USP41Q3LFD5 RNA5SP107-201ENST00000411358 122 ntBASIC3.47□□□□□ -1.85
USP41Q3LFD5 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.47□□□□□ -1.85
USP41Q3LFD5 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.47□□□□□ -1.85
USP41Q3LFD5 AC007283.2-201ENST00000424739 197 ntBASIC3.47□□□□□ -1.85
USP41Q3LFD5 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.47□□□□□ -1.85
USP41Q3LFD5 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.47□□□□□ -1.85
USP41Q3LFD5 AL353705.1-201ENST00000433468 480 ntBASIC3.47□□□□□ -1.85
USP41Q3LFD5 RPS24P1-201ENST00000438550 371 ntBASIC3.47□□□□□ -1.85
USP41Q3LFD5 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.47□□□□□ -1.85
USP41Q3LFD5 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.47□□□□□ -1.85
USP41Q3LFD5 RNU6-64P-201ENST00000517119 105 ntBASIC3.47□□□□□ -1.85
USP41Q3LFD5 ERHP1-201ENST00000523006 310 ntBASIC3.47□□□□□ -1.85
USP41Q3LFD5 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.47□□□□□ -1.85
USP41Q3LFD5 AC123904.3-201ENST00000547218 814 ntBASIC3.47□□□□□ -1.85
USP41Q3LFD5 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.47□□□□□ -1.85
USP41Q3LFD5 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.47□□□□□ -1.85
USP41Q3LFD5 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.47□□□□□ -1.85
USP41Q3LFD5 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.47□□□□□ -1.85
USP41Q3LFD5 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.47□□□□□ -1.85
USP41Q3LFD5 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.47□□□□□ -1.85
USP41Q3LFD5 AC078795.2-201ENST00000602835 1252 ntBASIC3.47□□□□□ -1.85
USP41Q3LFD5 AC073648.5-201ENST00000603502 305 ntBASIC3.47□□□□□ -1.85
USP41Q3LFD5 AP000860.1-201ENST00000605250 559 ntBASIC3.47□□□□□ -1.85
USP41Q3LFD5 AL161734.1-201ENST00000609720 557 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms