Protein–RNA interactions for Protein: Q14683

SMC1A, Structural maintenance of chromosomes protein 1A, humanhuman

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1AQ14683 AC021146.8-201ENST00000507455 733 ntBASIC3.11□□□□□ -1.91
SMC1AQ14683 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.11□□□□□ -1.91
SMC1AQ14683 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SMC1AQ14683 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.11□□□□□ -1.91
SMC1AQ14683 CYCSP39-201ENST00000565821 309 ntBASIC3.11□□□□□ -1.91
SMC1AQ14683 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.11□□□□□ -1.91
SMC1AQ14683 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.11□□□□□ -1.91
SMC1AQ14683 AC024153.1-201ENST00000603103 365 ntBASIC3.11□□□□□ -1.91
SMC1AQ14683 AC140725.3-201ENST00000616193 880 ntBASIC3.11□□□□□ -1.91
SMC1AQ14683 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.11□□□□□ -1.91
SMC1AQ14683 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SMC1AQ14683 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.11□□□□□ -1.91
SMC1AQ14683 Z82195.2-201ENST00000612348 18351 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 AL359693.1-201ENST00000614959 2407 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SMC1AQ14683 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
SMC1AQ14683 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SMC1AQ14683 AL161781.1-201ENST00000354277 403 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 RNU6-359P-201ENST00000365466 108 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.1□□□□□ -1.91
SMC1AQ14683 ANAPC10P1-201ENST00000395991 556 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 MIR1284-201ENST00000408337 120 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.1□□□□□ -1.91
SMC1AQ14683 TPMTP3-201ENST00000411928 735 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.1□□□□□ -1.91
SMC1AQ14683 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.1□□□□□ -1.91
SMC1AQ14683 RPS25P9-201ENST00000435591 252 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 RPS15AP7-201ENST00000439294 405 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 RPL23AP20-201ENST00000447965 421 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 AP000705.1-201ENST00000454567 350 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.1□□□□□ -1.91
SMC1AQ14683 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.1□□□□□ -1.91
SMC1AQ14683 SUMO2P6-201ENST00000505273 288 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.1□□□□□ -1.91
SMC1AQ14683 AC010587.2-201ENST00000511727 448 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.1□□□□□ -1.91
SMC1AQ14683 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SMC1AQ14683 AC009712.1-201ENST00000564938 316 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.1□□□□□ -1.91
SMC1AQ14683 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.1□□□□□ -1.91
SMC1AQ14683 AC005951.2-201ENST00000576282 495 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 MIR3945-201ENST00000581853 98 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 MIR4435-1-201ENST00000582552 80 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 AC015871.2-201ENST00000603605 948 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 AL161729.4-201ENST00000604650 476 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 AC006270.3-201ENST00000605967 1036 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 AC097478.2-201ENST00000610572 514 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 AC092106.3-201ENST00000611308 722 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SMC1AQ14683 AC013476.2-201ENST00000614456 459 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.1□□□□□ -1.91
SMC1AQ14683 AP000776.1-201ENST00000530032 1663 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.1□□□□□ -1.91
SMC1AQ14683 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SMC1AQ14683 ZNF876P-202ENST00000398732 1485 ntBASIC3.09□□□□□ -1.91
SMC1AQ14683 AL390862.1-201ENST00000635467 1469 ntBASIC3.09□□□□□ -1.91
SMC1AQ14683 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SMC1AQ14683 RNU4-82P-201ENST00000362443 140 ntBASIC3.09□□□□□ -1.91
SMC1AQ14683 RNU1-35P-201ENST00000362782 153 ntBASIC3.09□□□□□ -1.91
SMC1AQ14683 RNU6-217P-201ENST00000384164 104 ntBASIC3.09□□□□□ -1.91
SMC1AQ14683 RNU6-1207P-201ENST00000384343 107 ntBASIC3.09□□□□□ -1.91
SMC1AQ14683 U3.20-201ENST00000390909 217 ntBASIC3.09□□□□□ -1.91
SMC1AQ14683 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.09□□□□□ -1.91
SMC1AQ14683 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.09□□□□□ -1.91
SMC1AQ14683 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.09□□□□□ -1.91
SMC1AQ14683 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.09□□□□□ -1.91
SMC1AQ14683 AC098614.2-201ENST00000426040 255 ntBASIC3.09□□□□□ -1.91
SMC1AQ14683 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.09□□□□□ -1.91
SMC1AQ14683 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.09□□□□□ -1.91
SMC1AQ14683 MTND3P1-201ENST00000441336 220 ntBASIC3.09□□□□□ -1.91
SMC1AQ14683 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.09□□□□□ -1.91
SMC1AQ14683 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.09□□□□□ -1.91
SMC1AQ14683 AC113155.1-201ENST00000511141 769 ntBASIC3.09□□□□□ -1.91
SMC1AQ14683 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.09□□□□□ -1.91
SMC1AQ14683 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
SMC1AQ14683 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SMC1AQ14683 AL391261.3-201ENST00000557194 520 ntBASIC3.09□□□□□ -1.91
SMC1AQ14683 AC087465.1-201ENST00000560574 245 ntBASIC3.09□□□□□ -1.91
SMC1AQ14683 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.09□□□□□ -1.91
SMC1AQ14683 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SMC1AQ14683 MIR3670-2-201ENST00000582974 65 ntBASIC3.09□□□□□ -1.91
SMC1AQ14683 MIR3670-1-201ENST00000584160 65 ntBASIC3.09□□□□□ -1.91
SMC1AQ14683 MIR3670-3-201ENST00000584855 65 ntBASIC3.09□□□□□ -1.91
SMC1AQ14683 MIR4760-201ENST00000585040 80 ntBASIC3.09□□□□□ -1.91
SMC1AQ14683 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.09□□□□□ -1.91
SMC1AQ14683 AL158042.1-201ENST00000605338 460 ntBASIC3.09□□□□□ -1.91
SMC1AQ14683 AC245297.2-201ENST00000610119 565 ntBASIC3.09□□□□□ -1.91
SMC1AQ14683 MIR3670-4-201ENST00000612260 65 ntBASIC3.09□□□□□ -1.91
SMC1AQ14683 AC009039.2-201ENST00000624524 529 ntBASIC3.09□□□□□ -1.91
SMC1AQ14683 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SMC1AQ14683 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.09□□□□□ -1.92
SMC1AQ14683 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SMC1AQ14683 SNORA23-201ENST00000365128 182 ntBASIC3.08□□□□□ -1.92
SMC1AQ14683 RNU6-83P-201ENST00000384568 112 ntBASIC3.08□□□□□ -1.92
SMC1AQ14683 ZNF863P-201ENST00000426746 417 ntBASIC3.08□□□□□ -1.92
SMC1AQ14683 AL513043.1-201ENST00000439124 535 ntBASIC3.08□□□□□ -1.92
SMC1AQ14683 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.08□□□□□ -1.92
SMC1AQ14683 RPL7P18-201ENST00000478965 734 ntBASIC3.08□□□□□ -1.92
SMC1AQ14683 AC090525.1-201ENST00000479116 478 ntBASIC3.08□□□□□ -1.92
SMC1AQ14683 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms