Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 AC022418.1-201ENST00000624118 445 ntBASIC3.41□□□□□ -1.86
CFHR3Q02985 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.41□□□□□ -1.86
CFHR3Q02985 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.41□□□□□ -1.86
CFHR3Q02985 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CFHR3Q02985 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CFHR3Q02985 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.41□□□□□ -1.86
CFHR3Q02985 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CFHR3Q02985 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.41□□□□□ -1.86
CFHR3Q02985 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.41□□□□□ -1.86
CFHR3Q02985 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CFHR3Q02985 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CFHR3Q02985 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CFHR3Q02985 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CFHR3Q02985 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
CFHR3Q02985 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CFHR3Q02985 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
CFHR3Q02985 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CFHR3Q02985 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CFHR3Q02985 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CFHR3Q02985 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CFHR3Q02985 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
CFHR3Q02985 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CFHR3Q02985 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CFHR3Q02985 SNORA31-201ENST00000362607 130 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 RNU1-132P-201ENST00000364300 164 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 MIR578-201ENST00000384828 96 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CFHR3Q02985 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CFHR3Q02985 MIR548F5-201ENST00000408421 86 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 AC011933.1-201ENST00000413334 321 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 VN1R36P-201ENST00000414936 291 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 Z85995.1-201ENST00000415547 335 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.4□□□□□ -1.87
CFHR3Q02985 RPL21P109-201ENST00000422213 475 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 C4BPAP2-201ENST00000428434 478 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.4□□□□□ -1.87
CFHR3Q02985 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.4□□□□□ -1.87
CFHR3Q02985 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.4□□□□□ -1.87
CFHR3Q02985 AL132765.1-201ENST00000434165 553 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 RPL23AP89-201ENST00000439324 255 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 RPS24P13-201ENST00000442520 397 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.4□□□□□ -1.87
CFHR3Q02985 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.4□□□□□ -1.87
CFHR3Q02985 FGF7P3-201ENST00000454645 303 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.4□□□□□ -1.87
CFHR3Q02985 RN7SL691P-201ENST00000494487 301 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 MTCO1P29-201ENST00000496868 288 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.4□□□□□ -1.87
CFHR3Q02985 AC023141.12-201ENST00000512399 199 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.4□□□□□ -1.87
CFHR3Q02985 RN7SKP122-201ENST00000515923 296 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 OR5D17P-201ENST00000531492 978 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 CBX3P7-201ENST00000532876 502 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 AP004242.1-201ENST00000533701 349 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 RPL21P7-201ENST00000557463 483 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CFHR3Q02985 MIR5692C1-201ENST00000585309 91 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 AL354984.3-201ENST00000604803 325 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.4□□□□□ -1.87
CFHR3Q02985 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.4□□□□□ -1.87
CFHR3Q02985 AC114781.5-201ENST00000615297 108 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 AL021997.2-201ENST00000615674 271 ntBASIC3.4□□□□□ -1.87
CFHR3Q02985 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.4□□□□□ -1.87
CFHR3Q02985 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CFHR3Q02985 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CFHR3Q02985 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
CFHR3Q02985 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CFHR3Q02985 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CFHR3Q02985 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CFHR3Q02985 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.39□□□□□ -1.87
CFHR3Q02985 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CFHR3Q02985 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CFHR3Q02985 AL133243.3-201ENST00000617415 3004 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CFHR3Q02985 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CFHR3Q02985 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CFHR3Q02985 FRG1CP-201ENST00000358464 769 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 RPL32P3-201ENST00000359025 275 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 RNU1-94P-201ENST00000362627 173 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 RNU1-20P-201ENST00000363314 162 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 RNU6-1303P-201ENST00000364841 107 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 RNA5SP22-201ENST00000365393 109 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 RNA5SP366-201ENST00000365454 123 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
CFHR3Q02985 Y_RNA.387-201ENST00000383918 102 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 MIR195-201ENST00000385194 87 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 AL445189.1-201ENST00000405722 338 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 RAB28P1-201ENST00000411517 641 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 AC016831.2-201ENST00000417179 352 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 RPL7P10-201ENST00000417407 739 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 AC018644.1-201ENST00000429934 551 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.39□□□□□ -1.87
CFHR3Q02985 RPL35AP15-201ENST00000468042 339 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 AC087884.1-201ENST00000469738 328 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 AC109327.1-201ENST00000471666 403 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 AC117503.1-201ENST00000472241 394 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 RPS20P22-201ENST00000473700 357 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 AL160314.1-201ENST00000490836 438 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.39□□□□□ -1.87
CFHR3Q02985 AL592156.1-201ENST00000508758 304 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms