Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 AL731537.2-201ENST00000561565 951 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.81□□□□□ -2.12
HOXC5Q00444 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.81□□□□□ -2.12
HOXC5Q00444 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.81□□□□□ -2.12
HOXC5Q00444 AP001542.2-201ENST00000593141 364 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.81□□□□□ -2.12
HOXC5Q00444 RPAP2P1-201ENST00000603626 1168 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 MTND4LP5-201ENST00000605152 292 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 AC103710.1-201ENST00000610003 901 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 MIR8084-201ENST00000614105 89 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 AC009090.3-201ENST00000616553 565 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 MIR6130-201ENST00000619419 109 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 AC098657.3-201ENST00000620434 263 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 YWHAEP7-203ENST00000622054 312 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 AC068057.2-201ENST00000624047 895 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 AC064859.1-201ENST00000624741 174 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 AC007785.2-201ENST00000598627 1916 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HOXC5Q00444 CENPCP1-201ENST00000533085 2578 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.8□□□□□ -2.12
HOXC5Q00444 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HOXC5Q00444 RNU6-549P-201ENST00000384433 107 ntBASIC1.8□□□□□ -2.12
HOXC5Q00444 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.8□□□□□ -2.12
HOXC5Q00444 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.8□□□□□ -2.12
HOXC5Q00444 AL139415.2-201ENST00000431968 163 ntBASIC1.8□□□□□ -2.12
HOXC5Q00444 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.8□□□□□ -2.12
HOXC5Q00444 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.8□□□□□ -2.12
HOXC5Q00444 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.8□□□□□ -2.12
HOXC5Q00444 ANXA2P1-201ENST00000505539 926 ntBASIC1.8□□□□□ -2.12
HOXC5Q00444 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.8□□□□□ -2.12
HOXC5Q00444 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.8□□□□□ -2.12
HOXC5Q00444 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.8□□□□□ -2.12
HOXC5Q00444 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.8□□□□□ -2.12
HOXC5Q00444 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.8□□□□□ -2.12
HOXC5Q00444 SCARNA15.2-201ENST00000516409 127 ntBASIC1.8□□□□□ -2.12
HOXC5Q00444 SNORA31.18-201ENST00000517043 134 ntBASIC1.8□□□□□ -2.12
HOXC5Q00444 HMGN1P28-201ENST00000521340 364 ntBASIC1.8□□□□□ -2.12
HOXC5Q00444 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.8□□□□□ -2.12
HOXC5Q00444 AC044913.1-201ENST00000557200 430 ntBASIC1.8□□□□□ -2.12
HOXC5Q00444 AL049838.1-201ENST00000563647 981 ntBASIC1.8□□□□□ -2.12
HOXC5Q00444 AGGF1P5-201ENST00000567900 919 ntBASIC1.8□□□□□ -2.12
HOXC5Q00444 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.8□□□□□ -2.12
HOXC5Q00444 AC090330.1-201ENST00000588646 764 ntBASIC1.8□□□□□ -2.12
HOXC5Q00444 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.8□□□□□ -2.12
HOXC5Q00444 AP001429.1-201ENST00000602568 530 ntBASIC1.8□□□□□ -2.12
HOXC5Q00444 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.8□□□□□ -2.12
HOXC5Q00444 AL590808.1-201ENST00000618696 141 ntBASIC1.8□□□□□ -2.12
HOXC5Q00444 AC084824.4-201ENST00000620106 731 ntBASIC1.8□□□□□ -2.12
HOXC5Q00444 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.8□□□□□ -2.12
HOXC5Q00444 HPVC1-201ENST00000629899 1198 ntBASIC1.8□□□□□ -2.12
HOXC5Q00444 AC005832.2-201ENST00000538921 1430 ntBASIC1.8□□□□□ -2.12
HOXC5Q00444 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
HOXC5Q00444 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.79□□□□□ -2.12
HOXC5Q00444 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HOXC5Q00444 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HOXC5Q00444 Y_RNA.111-201ENST00000363248 100 ntBASIC1.79□□□□□ -2.12
HOXC5Q00444 RN7SKP226-201ENST00000364912 300 ntBASIC1.79□□□□□ -2.12
HOXC5Q00444 RNU2-49P-201ENST00000410666 184 ntBASIC1.79□□□□□ -2.12
HOXC5Q00444 RNU6-1328P-201ENST00000410938 106 ntBASIC1.79□□□□□ -2.12
HOXC5Q00444 RNA5SP489-201ENST00000410986 109 ntBASIC1.79□□□□□ -2.12
HOXC5Q00444 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.79□□□□□ -2.12
HOXC5Q00444 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.79□□□□□ -2.12
HOXC5Q00444 CCDC58P2-201ENST00000417131 366 ntBASIC1.79□□□□□ -2.12
HOXC5Q00444 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.79□□□□□ -2.12
HOXC5Q00444 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.79□□□□□ -2.12
HOXC5Q00444 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.79□□□□□ -2.12
HOXC5Q00444 AL445646.1-201ENST00000431784 216 ntBASIC1.79□□□□□ -2.12
HOXC5Q00444 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.79□□□□□ -2.12
HOXC5Q00444 MTCYBP45-201ENST00000435243 565 ntBASIC1.79□□□□□ -2.12
HOXC5Q00444 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.79□□□□□ -2.12
HOXC5Q00444 UBE2FP3-201ENST00000436366 524 ntBASIC1.79□□□□□ -2.12
HOXC5Q00444 BNIP3P2-201ENST00000441221 577 ntBASIC1.79□□□□□ -2.12
HOXC5Q00444 RPL7P36-201ENST00000444633 681 ntBASIC1.79□□□□□ -2.12
HOXC5Q00444 COX6CP12-201ENST00000446748 202 ntBASIC1.79□□□□□ -2.12
HOXC5Q00444 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.79□□□□□ -2.12
HOXC5Q00444 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
HOXC5Q00444 AC106872.3-201ENST00000495104 446 ntBASIC1.79□□□□□ -2.12
HOXC5Q00444 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.79□□□□□ -2.12
HOXC5Q00444 AC023632.1-201ENST00000518463 375 ntBASIC1.79□□□□□ -2.12
HOXC5Q00444 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.79□□□□□ -2.12
HOXC5Q00444 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.79□□□□□ -2.12
HOXC5Q00444 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.79□□□□□ -2.12
HOXC5Q00444 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.79□□□□□ -2.12
HOXC5Q00444 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.79□□□□□ -2.12
HOXC5Q00444 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.79□□□□□ -2.12
HOXC5Q00444 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.79□□□□□ -2.12
HOXC5Q00444 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.79□□□□□ -2.12
HOXC5Q00444 AC079148.1-201ENST00000565944 819 ntBASIC1.79□□□□□ -2.12
HOXC5Q00444 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.79□□□□□ -2.12
HOXC5Q00444 MIR4666A-201ENST00000580160 79 ntBASIC1.79□□□□□ -2.12
HOXC5Q00444 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.79□□□□□ -2.12
HOXC5Q00444 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.79□□□□□ -2.12
HOXC5Q00444 SNORD14A-201ENST00000606526 91 ntBASIC1.79□□□□□ -2.12
HOXC5Q00444 DUXAP9-208ENST00000622815 614 ntBASIC1.79□□□□□ -2.12
HOXC5Q00444 AC097460.3-201ENST00000623099 442 ntBASIC1.79□□□□□ -2.12
HOXC5Q00444 MIR219B-201ENST00000637023 88 ntBASIC1.79□□□□□ -2.12
HOXC5Q00444 AL354685.2-201ENST00000448218 1447 ntBASIC1.79□□□□□ -2.12
HOXC5Q00444 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HOXC5Q00444 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HOXC5Q00444 DDX10P1-201ENST00000448545 1933 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms