Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AL445183.3-201ENST00000414168 502 ntBASIC0.82□□□□□ -2.28
PRKDCP78527 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.82□□□□□ -2.28
PRKDCP78527 DEFB108E-201ENST00000524692 240 ntBASIC0.82□□□□□ -2.28
PRKDCP78527 AL161912.3-201ENST00000605404 628 ntBASIC0.82□□□□□ -2.28
PRKDCP78527 AC121761.2-201ENST00000617300 689 ntBASIC0.82□□□□□ -2.28
PRKDCP78527 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.82□□□□□ -2.28
PRKDCP78527 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.82□□□□□ -2.28
PRKDCP78527 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
PRKDCP78527 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC0.82□□□□□ -2.28
PRKDCP78527 AP000567.1-201ENST00000406413 156 ntBASIC0.82□□□□□ -2.28
PRKDCP78527 RPL7P34-201ENST00000433316 712 ntBASIC0.82□□□□□ -2.28
PRKDCP78527 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.82□□□□□ -2.28
PRKDCP78527 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC0.82□□□□□ -2.28
PRKDCP78527 RPS15AP34-201ENST00000487776 387 ntBASIC0.82□□□□□ -2.28
PRKDCP78527 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC0.82□□□□□ -2.28
PRKDCP78527 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC0.82□□□□□ -2.28
PRKDCP78527 AC130650.2-201ENST00000618736 2403 ntBASIC0.82□□□□□ -2.28
PRKDCP78527 AC098592.2-201ENST00000413158 265 ntBASIC0.82□□□□□ -2.28
PRKDCP78527 PMCHL2-203ENST00000457791 237 ntBASIC0.82□□□□□ -2.28
PRKDCP78527 RPL31P58-201ENST00000469001 379 ntBASIC0.82□□□□□ -2.28
PRKDCP78527 AC022493.1-201ENST00000492984 337 ntBASIC0.82□□□□□ -2.28
PRKDCP78527 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
PRKDCP78527 RN7SKP5-201ENST00000517045 272 ntBASIC0.82□□□□□ -2.28
PRKDCP78527 AC025423.2-201ENST00000537570 439 ntBASIC0.82□□□□□ -2.28
PRKDCP78527 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC0.82□□□□□ -2.28
PRKDCP78527 AC096586.2-201ENST00000610260 441 ntBASIC0.82□□□□□ -2.28
PRKDCP78527 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
PRKDCP78527 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
PRKDCP78527 BX682237.1-201ENST00000415016 335 ntBASIC0.81□□□□□ -2.28
PRKDCP78527 MTATP6P4-201ENST00000427725 675 ntBASIC0.81□□□□□ -2.28
PRKDCP78527 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.81□□□□□ -2.28
PRKDCP78527 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC0.81□□□□□ -2.28
PRKDCP78527 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.81□□□□□ -2.28
PRKDCP78527 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC0.81□□□□□ -2.28
PRKDCP78527 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC0.81□□□□□ -2.28
PRKDCP78527 SEM1P1-201ENST00000506694 209 ntBASIC0.81□□□□□ -2.28
PRKDCP78527 IMMP1LP2-201ENST00000552954 492 ntBASIC0.81□□□□□ -2.28
PRKDCP78527 RNU4ATAC16P-201ENST00000408512 126 ntBASIC0.81□□□□□ -2.28
PRKDCP78527 RNA5SP127-201ENST00000411051 133 ntBASIC0.81□□□□□ -2.28
PRKDCP78527 AC073264.1-201ENST00000411508 416 ntBASIC0.81□□□□□ -2.28
PRKDCP78527 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC0.81□□□□□ -2.28
PRKDCP78527 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC0.81□□□□□ -2.28
PRKDCP78527 HSPE1P4-201ENST00000550617 308 ntBASIC0.81□□□□□ -2.28
PRKDCP78527 ACTR3BP3-201ENST00000565577 979 ntBASIC0.81□□□□□ -2.28
PRKDCP78527 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
PRKDCP78527 RNA5SP331-201ENST00000364986 107 ntBASIC0.81□□□□□ -2.28
PRKDCP78527 RNU1-109P-201ENST00000383960 147 ntBASIC0.81□□□□□ -2.28
PRKDCP78527 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
PRKDCP78527 RNU11-5P-201ENST00000391216 129 ntBASIC0.81□□□□□ -2.28
PRKDCP78527 AC234064.1-201ENST00000436312 247 ntBASIC0.81□□□□□ -2.28
PRKDCP78527 RNU6-1218P-201ENST00000458990 108 ntBASIC0.81□□□□□ -2.28
PRKDCP78527 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC0.81□□□□□ -2.28
PRKDCP78527 OR5BM1P-201ENST00000512021 366 ntBASIC0.81□□□□□ -2.28
PRKDCP78527 RNU11-2P-201ENST00000516898 142 ntBASIC0.81□□□□□ -2.28
PRKDCP78527 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC0.81□□□□□ -2.28
PRKDCP78527 OR10V3P-201ENST00000525712 725 ntBASIC0.81□□□□□ -2.28
PRKDCP78527 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC0.81□□□□□ -2.28
PRKDCP78527 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC0.81□□□□□ -2.28
PRKDCP78527 SNHG22-203ENST00000617833 660 ntBASIC0.81□□□□□ -2.28
PRKDCP78527 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.81□□□□□ -2.28
PRKDCP78527 SNRPEP10-201ENST00000420249 274 ntBASIC0.8□□□□□ -2.28
PRKDCP78527 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.8□□□□□ -2.28
PRKDCP78527 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC0.8□□□□□ -2.28
PRKDCP78527 LIAS-206ENST00000513731 826 ntTSL 5 BASIC0.8□□□□□ -2.28
PRKDCP78527 OR6C7P-201ENST00000547875 934 ntBASIC0.8□□□□□ -2.28
PRKDCP78527 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.8□□□□□ -2.28
PRKDCP78527 AC025918.2-201ENST00000558683 763 ntBASIC0.8□□□□□ -2.28
PRKDCP78527 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC0.8□□□□□ -2.28
PRKDCP78527 AC022662.1-201ENST00000580252 331 ntBASIC0.8□□□□□ -2.28
PRKDCP78527 DUXAP3-201ENST00000603616 594 ntBASIC0.8□□□□□ -2.28
PRKDCP78527 AC138915.1-201ENST00000565427 1685 ntBASIC0.8□□□□□ -2.28
PRKDCP78527 MOB4-205ENST00000409916 829 ntTSL 3 BASIC0.8□□□□□ -2.28
PRKDCP78527 Z75741.2-201ENST00000417272 1167 ntBASIC0.8□□□□□ -2.28
PRKDCP78527 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC0.8□□□□□ -2.28
PRKDCP78527 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC0.8□□□□□ -2.28
PRKDCP78527 RNU6-56P-201ENST00000516986 93 ntBASIC0.8□□□□□ -2.28
PRKDCP78527 SNORA31.23-201ENST00000517219 133 ntBASIC0.8□□□□□ -2.28
PRKDCP78527 RNU1-104P-201ENST00000517280 175 ntBASIC0.8□□□□□ -2.28
PRKDCP78527 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC0.8□□□□□ -2.28
PRKDCP78527 VN1R84P-201ENST00000593697 235 ntBASIC0.8□□□□□ -2.28
PRKDCP78527 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC0.8□□□□□ -2.28
PRKDCP78527 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
PRKDCP78527 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
PRKDCP78527 RNA5SP393-201ENST00000363423 117 ntBASIC0.8□□□□□ -2.28
PRKDCP78527 RNU6-670P-201ENST00000364312 104 ntBASIC0.8□□□□□ -2.28
PRKDCP78527 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
PRKDCP78527 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.8□□□□□ -2.28
PRKDCP78527 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC0.8□□□□□ -2.28
PRKDCP78527 AC244035.1-201ENST00000430042 390 ntBASIC0.8□□□□□ -2.28
PRKDCP78527 OR6K5P-201ENST00000447050 945 ntBASIC0.8□□□□□ -2.28
PRKDCP78527 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC0.8□□□□□ -2.28
PRKDCP78527 RNU7-27P-201ENST00000459281 62 ntBASIC0.8□□□□□ -2.28
PRKDCP78527 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.8□□□□□ -2.28
PRKDCP78527 OR5AQ1P-201ENST00000527596 927 ntBASIC0.8□□□□□ -2.28
PRKDCP78527 MTCO1P40-201ENST00000574371 625 ntBASIC0.8□□□□□ -2.28
PRKDCP78527 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.8□□□□□ -2.28
PRKDCP78527 BNIP3P7-201ENST00000605641 516 ntBASIC0.8□□□□□ -2.28
PRKDCP78527 AC006270.3-201ENST00000605967 1036 ntBASIC0.8□□□□□ -2.28
PRKDCP78527 AC091925.1-201ENST00000623204 462 ntBASIC0.8□□□□□ -2.28
PRKDCP78527 CUL4AP1-201ENST00000514750 1863 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms