Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RN7SL132P-201ENST00000478131 296 ntBASIC3.84□□□□□ -1.79
NKX6-1P78426 AP001086.1-201ENST00000494882 321 ntBASIC3.84□□□□□ -1.79
NKX6-1P78426 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.84□□□□□ -1.79
NKX6-1P78426 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.84□□□□□ -1.79
NKX6-1P78426 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.84□□□□□ -1.79
NKX6-1P78426 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.84□□□□□ -1.79
NKX6-1P78426 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.84□□□□□ -1.79
NKX6-1P78426 AC022690.1-201ENST00000526681 550 ntBASIC3.84□□□□□ -1.79
NKX6-1P78426 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.84□□□□□ -1.79
NKX6-1P78426 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.84□□□□□ -1.79
NKX6-1P78426 AC007424.1-203ENST00000554613 687 ntBASIC3.84□□□□□ -1.79
NKX6-1P78426 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.84□□□□□ -1.79
NKX6-1P78426 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.84□□□□□ -1.79
NKX6-1P78426 AC090617.10-201ENST00000624308 134 ntBASIC3.84□□□□□ -1.79
NKX6-1P78426 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NKX6-1P78426 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.84□□□□□ -1.8
NKX6-1P78426 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NKX6-1P78426 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX6-1P78426 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.83□□□□□ -1.8
NKX6-1P78426 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NKX6-1P78426 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
NKX6-1P78426 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.83□□□□□ -1.8
NKX6-1P78426 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NKX6-1P78426 MIR383-201ENST00000362257 73 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 RNU6-512P-201ENST00000364438 103 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 Y_RNA.245-201ENST00000364493 95 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 RNA5SP151-201ENST00000365632 117 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX6-1P78426 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NKX6-1P78426 SNORA32.2-201ENST00000384049 122 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 MIR493-201ENST00000385254 89 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 HSPE1P26-201ENST00000405341 275 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 RNU2-37P-201ENST00000410695 177 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 Y_RNA.615-201ENST00000410769 117 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.83□□□□□ -1.8
NKX6-1P78426 Z85995.1-201ENST00000415547 335 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.83□□□□□ -1.8
NKX6-1P78426 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.83□□□□□ -1.8
NKX6-1P78426 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.83□□□□□ -1.8
NKX6-1P78426 TAAR7P-201ENST00000436141 242 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.83□□□□□ -1.8
NKX6-1P78426 AL671855.1-201ENST00000446875 1203 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.83□□□□□ -1.8
NKX6-1P78426 snoU13.22-201ENST00000459428 104 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 Y_RNA.654-201ENST00000497848 106 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 AC091951.2-201ENST00000500762 203 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.83□□□□□ -1.8
NKX6-1P78426 AC008549.1-201ENST00000512900 643 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 AC104136.1-201ENST00000512969 394 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 AC114781.4-201ENST00000513707 639 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 RNU6-507P-201ENST00000516045 100 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 RNU6-875P-201ENST00000516488 106 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 SNORA67.7-201ENST00000516664 135 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 RNA5SP290-201ENST00000517133 127 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 NARSP2-201ENST00000518524 679 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 AC100770.1-201ENST00000532310 322 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 AC243972.3-201ENST00000539655 198 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.83□□□□□ -1.8
NKX6-1P78426 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NKX6-1P78426 MIR5692A1-201ENST00000580523 69 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.83□□□□□ -1.8
NKX6-1P78426 MIR3158-1-201ENST00000583596 81 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.83□□□□□ -1.8
NKX6-1P78426 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.83□□□□□ -1.8
NKX6-1P78426 AP002360.3-201ENST00000607673 710 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 U2.17-201ENST00000611454 95 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 AC103858.2-201ENST00000621471 543 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 AL512643.1-201ENST00000635735 524 ntBASIC3.83□□□□□ -1.8
NKX6-1P78426 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.83□□□□□ -1.8
NKX6-1P78426 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX6-1P78426 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NKX6-1P78426 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX6-1P78426 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX6-1P78426 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NKX6-1P78426 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NKX6-1P78426 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.82□□□□□ -1.8
NKX6-1P78426 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.82□□□□□ -1.8
NKX6-1P78426 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NKX6-1P78426 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NKX6-1P78426 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.82□□□□□ -1.8
NKX6-1P78426 AP004289.2-201ENST00000444413 1457 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 RNU6-845P-201ENST00000362578 103 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 RNU6-434P-201ENST00000384376 107 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 RNU6-393P-201ENST00000384475 107 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 RNU6-1127P-201ENST00000384580 107 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 MIR3065-201ENST00000390137 79 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NKX6-1P78426 SNORD70.1-201ENST00000391007 85 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 RNU6-1197P-201ENST00000391183 107 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 AL139397.2-201ENST00000404529 772 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 AL139095.3-201ENST00000419672 1203 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 RPL7P2-201ENST00000427639 268 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 AL592045.1-201ENST00000429867 352 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 HSPD1P21-201ENST00000436541 245 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 SNRPEP8-201ENST00000442866 260 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 AC008264.1-201ENST00000447612 367 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.82□□□□□ -1.8
NKX6-1P78426 AL590639.1-201ENST00000456484 337 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 RNU6-1208P-201ENST00000459588 107 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 AC108022.1-201ENST00000493466 478 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms