Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC004815.1-201ENST00000484185 331 ntBASIC1.1□□□□□ -2.23
RPS28P62857 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.1□□□□□ -2.23
RPS28P62857 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC1.1□□□□□ -2.23
RPS28P62857 HMGN1P15-201ENST00000513870 295 ntBASIC1.1□□□□□ -2.23
RPS28P62857 RNA5SP473-201ENST00000516402 125 ntBASIC1.1□□□□□ -2.23
RPS28P62857 RNA5SP290-201ENST00000517133 127 ntBASIC1.1□□□□□ -2.23
RPS28P62857 RNA5SP165-201ENST00000517142 115 ntBASIC1.1□□□□□ -2.23
RPS28P62857 AP004607.1-201ENST00000524456 203 ntBASIC1.1□□□□□ -2.23
RPS28P62857 AP005597.4-201ENST00000526762 229 ntBASIC1.1□□□□□ -2.23
RPS28P62857 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.1□□□□□ -2.23
RPS28P62857 RRN3P3-201ENST00000549207 578 ntBASIC1.1□□□□□ -2.23
RPS28P62857 CKS1BP1-201ENST00000555221 240 ntBASIC1.1□□□□□ -2.23
RPS28P62857 H3F3AP1-201ENST00000559984 334 ntBASIC1.1□□□□□ -2.23
RPS28P62857 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC1.1□□□□□ -2.23
RPS28P62857 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.1□□□□□ -2.23
RPS28P62857 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC1.1□□□□□ -2.23
RPS28P62857 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC1.1□□□□□ -2.23
RPS28P62857 BNIP3P24-201ENST00000593398 557 ntBASIC1.1□□□□□ -2.23
RPS28P62857 SNRPGP17-201ENST00000603780 214 ntBASIC1.1□□□□□ -2.23
RPS28P62857 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
RPS28P62857 MIR6778-201ENST00000617912 73 ntBASIC1.1□□□□□ -2.23
RPS28P62857 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC1.1□□□□□ -2.23
RPS28P62857 MIR1291-201ENST00000627649 87 ntBASIC1.1□□□□□ -2.23
RPS28P62857 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
RPS28P62857 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.1□□□□□ -2.23
RPS28P62857 SPRR2C-201ENST00000290702 219 ntBASIC1.09□□□□□ -2.23
RPS28P62857 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
RPS28P62857 RNU5E-1-201ENST00000362477 120 ntBASIC1.09□□□□□ -2.23
RPS28P62857 RNU1-112P-201ENST00000364401 164 ntBASIC1.09□□□□□ -2.23
RPS28P62857 RNU6-628P-201ENST00000410675 107 ntBASIC1.09□□□□□ -2.23
RPS28P62857 RNA5SP21-201ENST00000410917 96 ntBASIC1.09□□□□□ -2.23
RPS28P62857 ELOCP19-201ENST00000411919 318 ntBASIC1.09□□□□□ -2.23
RPS28P62857 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
RPS28P62857 HSFY4P-201ENST00000415994 1181 ntBASIC1.09□□□□□ -2.23
RPS28P62857 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC1.09□□□□□ -2.23
RPS28P62857 UBE2V1P4-201ENST00000425374 344 ntBASIC1.09□□□□□ -2.23
RPS28P62857 C1DP1-201ENST00000426049 402 ntBASIC1.09□□□□□ -2.23
RPS28P62857 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.09□□□□□ -2.23
RPS28P62857 MTCO2P20-201ENST00000437339 673 ntBASIC1.09□□□□□ -2.23
RPS28P62857 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
RPS28P62857 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC1.09□□□□□ -2.23
RPS28P62857 AL118520.1-201ENST00000450770 291 ntBASIC1.09□□□□□ -2.23
RPS28P62857 RPS3P1-201ENST00000456781 192 ntBASIC1.09□□□□□ -2.23
RPS28P62857 AL441985.1-201ENST00000457727 251 ntBASIC1.09□□□□□ -2.23
RPS28P62857 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.09□□□□□ -2.23
RPS28P62857 AC117503.1-201ENST00000472241 394 ntBASIC1.09□□□□□ -2.23
RPS28P62857 AC109925.1-201ENST00000478069 331 ntBASIC1.09□□□□□ -2.23
RPS28P62857 RPL36AP48-201ENST00000485521 314 ntBASIC1.09□□□□□ -2.23
RPS28P62857 AC132942.1-201ENST00000486753 483 ntBASIC1.09□□□□□ -2.23
RPS28P62857 RNA5SP135-201ENST00000517019 125 ntBASIC1.09□□□□□ -2.23
RPS28P62857 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.09□□□□□ -2.23
RPS28P62857 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.09□□□□□ -2.23
RPS28P62857 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC1.09□□□□□ -2.23
RPS28P62857 AP001317.1-201ENST00000531194 960 ntBASIC1.09□□□□□ -2.23
RPS28P62857 AC090502.2-201ENST00000549267 280 ntBASIC1.09□□□□□ -2.23
RPS28P62857 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC1.09□□□□□ -2.23
RPS28P62857 AC021739.1-201ENST00000559631 174 ntBASIC1.09□□□□□ -2.23
RPS28P62857 MIR3618-201ENST00000580330 88 ntBASIC1.09□□□□□ -2.23
RPS28P62857 MIR5007-201ENST00000583098 95 ntBASIC1.09□□□□□ -2.23
RPS28P62857 BNIP3P23-201ENST00000599655 511 ntBASIC1.09□□□□□ -2.23
RPS28P62857 ELOCP35-201ENST00000604289 336 ntBASIC1.09□□□□□ -2.23
RPS28P62857 DUSP12P1-201ENST00000612874 516 ntBASIC1.09□□□□□ -2.23
RPS28P62857 AC008121.3-201ENST00000618726 433 ntBASIC1.09□□□□□ -2.23
RPS28P62857 AL109620.1-201ENST00000618738 1197 ntBASIC1.09□□□□□ -2.23
RPS28P62857 U1.36-201ENST00000620684 176 ntBASIC1.09□□□□□ -2.23
RPS28P62857 AC012150.2-201ENST00000621300 544 ntBASIC1.09□□□□□ -2.23
RPS28P62857 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
RPS28P62857 AC004009.2-201ENST00000623016 728 ntBASIC1.09□□□□□ -2.23
RPS28P62857 AC106730.3-201ENST00000624568 641 ntBASIC1.09□□□□□ -2.23
RPS28P62857 AC017037.3-201ENST00000625016 472 ntBASIC1.09□□□□□ -2.23
RPS28P62857 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.09□□□□□ -2.23
RPS28P62857 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.09□□□□□ -2.23
RPS28P62857 DBF4P1-201ENST00000412976 1892 ntBASIC1.09□□□□□ -2.24
RPS28P62857 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC1.09□□□□□ -2.24
RPS28P62857 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.09□□□□□ -2.24
RPS28P62857 SNORA67.4-201ENST00000384688 142 ntBASIC1.08□□□□□ -2.24
RPS28P62857 OR6C69P-201ENST00000394268 893 ntBASIC1.08□□□□□ -2.24
RPS28P62857 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
RPS28P62857 AL024507.1-201ENST00000412741 274 ntBASIC1.08□□□□□ -2.24
RPS28P62857 AC009310.1-201ENST00000414414 451 ntBASIC1.08□□□□□ -2.24
RPS28P62857 AC063979.1-201ENST00000415539 377 ntBASIC1.08□□□□□ -2.24
RPS28P62857 AL356095.1-201ENST00000417217 199 ntBASIC1.08□□□□□ -2.24
RPS28P62857 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC1.08□□□□□ -2.24
RPS28P62857 MTCYBP32-201ENST00000427945 1084 ntBASIC1.08□□□□□ -2.24
RPS28P62857 AL360081.1-201ENST00000428299 555 ntBASIC1.08□□□□□ -2.24
RPS28P62857 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
RPS28P62857 HMGN2P3-201ENST00000433603 273 ntBASIC1.08□□□□□ -2.24
RPS28P62857 AC073063.1-201ENST00000434352 607 ntBASIC1.08□□□□□ -2.24
RPS28P62857 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC1.08□□□□□ -2.24
RPS28P62857 TPTE2P1-204ENST00000435256 593 ntBASIC1.08□□□□□ -2.24
RPS28P62857 HMGN2P5-201ENST00000436882 273 ntBASIC1.08□□□□□ -2.24
RPS28P62857 CR769776.1-201ENST00000441254 787 ntBASIC1.08□□□□□ -2.24
RPS28P62857 USP9YP8-201ENST00000441913 500 ntBASIC1.08□□□□□ -2.24
RPS28P62857 VN1R10P-201ENST00000447106 875 ntBASIC1.08□□□□□ -2.24
RPS28P62857 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.08□□□□□ -2.24
RPS28P62857 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.08□□□□□ -2.24
RPS28P62857 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.08□□□□□ -2.24
RPS28P62857 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.08□□□□□ -2.24
RPS28P62857 AC006512.1-201ENST00000468816 291 ntBASIC1.08□□□□□ -2.24
RPS28P62857 AC013828.1-201ENST00000481845 158 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms