Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 OOSP1P1-201ENST00000423265 274 ntBASIC2.31□□□□□ -2.04
VSX2P58304 AL365496.1-201ENST00000426885 215 ntBASIC2.31□□□□□ -2.04
VSX2P58304 ZYG11AP1-201ENST00000430329 837 ntBASIC2.31□□□□□ -2.04
VSX2P58304 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.31□□□□□ -2.04
VSX2P58304 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.31□□□□□ -2.04
VSX2P58304 DDX3P2-201ENST00000446138 111 ntBASIC2.31□□□□□ -2.04
VSX2P58304 MTCO2P25-201ENST00000447065 681 ntBASIC2.31□□□□□ -2.04
VSX2P58304 WASF1P1-201ENST00000447560 1131 ntBASIC2.31□□□□□ -2.04
VSX2P58304 AC092155.2-201ENST00000454675 477 ntBASIC2.31□□□□□ -2.04
VSX2P58304 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.31□□□□□ -2.04
VSX2P58304 snoU13.8-201ENST00000458890 104 ntBASIC2.31□□□□□ -2.04
VSX2P58304 AC005410.1-202ENST00000460347 485 ntBASIC2.31□□□□□ -2.04
VSX2P58304 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.31□□□□□ -2.04
VSX2P58304 RN7SL636P-201ENST00000497504 294 ntBASIC2.31□□□□□ -2.04
VSX2P58304 AC234781.5-201ENST00000508429 271 ntBASIC2.31□□□□□ -2.04
VSX2P58304 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.31□□□□□ -2.04
VSX2P58304 AC079395.1-201ENST00000510981 262 ntBASIC2.31□□□□□ -2.04
VSX2P58304 RNU1-104P-201ENST00000517280 175 ntBASIC2.31□□□□□ -2.04
VSX2P58304 AC021451.1-201ENST00000523498 1129 ntBASIC2.31□□□□□ -2.04
VSX2P58304 AC021269.2-201ENST00000532318 330 ntBASIC2.31□□□□□ -2.04
VSX2P58304 AL512310.1-201ENST00000548639 172 ntBASIC2.31□□□□□ -2.04
VSX2P58304 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.31□□□□□ -2.04
VSX2P58304 AMZ2P1-203ENST00000565833 850 ntBASIC2.31□□□□□ -2.04
VSX2P58304 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.31□□□□□ -2.04
VSX2P58304 AC079089.3-201ENST00000603094 673 ntBASIC2.31□□□□□ -2.04
VSX2P58304 AC005014.3-201ENST00000605985 190 ntBASIC2.31□□□□□ -2.04
VSX2P58304 AL161629.2-201ENST00000615347 275 ntBASIC2.31□□□□□ -2.04
VSX2P58304 AL590808.1-201ENST00000618696 141 ntBASIC2.31□□□□□ -2.04
VSX2P58304 MIR6130-201ENST00000619419 109 ntBASIC2.31□□□□□ -2.04
VSX2P58304 AC006386.1-201ENST00000619436 415 ntBASIC2.31□□□□□ -2.04
VSX2P58304 ELF2P3-201ENST00000445099 1506 ntBASIC2.31□□□□□ -2.04
VSX2P58304 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
VSX2P58304 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
VSX2P58304 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.31□□□□□ -2.04
VSX2P58304 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.31□□□□□ -2.04
VSX2P58304 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
VSX2P58304 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.3□□□□□ -2.04
VSX2P58304 SNORA41-201ENST00000384675 132 ntBASIC2.3□□□□□ -2.04
VSX2P58304 RNU6-114P-201ENST00000384704 105 ntBASIC2.3□□□□□ -2.04
VSX2P58304 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VSX2P58304 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.3□□□□□ -2.04
VSX2P58304 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.3□□□□□ -2.04
VSX2P58304 AL953862.1-201ENST00000423016 168 ntBASIC2.3□□□□□ -2.04
VSX2P58304 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.3□□□□□ -2.04
VSX2P58304 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.3□□□□□ -2.04
VSX2P58304 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.3□□□□□ -2.04
VSX2P58304 AC007327.1-201ENST00000447461 264 ntBASIC2.3□□□□□ -2.04
VSX2P58304 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.3□□□□□ -2.04
VSX2P58304 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.3□□□□□ -2.04
VSX2P58304 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.3□□□□□ -2.04
VSX2P58304 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.3□□□□□ -2.04
VSX2P58304 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.3□□□□□ -2.04
VSX2P58304 AC026436.1-201ENST00000510537 270 ntBASIC2.3□□□□□ -2.04
VSX2P58304 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.3□□□□□ -2.04
VSX2P58304 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.3□□□□□ -2.04
VSX2P58304 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.3□□□□□ -2.04
VSX2P58304 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.3□□□□□ -2.04
VSX2P58304 MTCYBP23-201ENST00000558717 1102 ntBASIC2.3□□□□□ -2.04
VSX2P58304 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.3□□□□□ -2.04
VSX2P58304 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.3□□□□□ -2.04
VSX2P58304 AC021749.1-201ENST00000604322 607 ntBASIC2.3□□□□□ -2.04
VSX2P58304 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VSX2P58304 AC005832.2-201ENST00000538921 1430 ntBASIC2.3□□□□□ -2.04
VSX2P58304 MTCO1P9-201ENST00000505577 1534 ntBASIC2.3□□□□□ -2.04
VSX2P58304 AC087359.1-201ENST00000508335 1740 ntBASIC2.3□□□□□ -2.04
VSX2P58304 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
VSX2P58304 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
VSX2P58304 TPTE2P4-201ENST00000258589 1605 ntBASIC2.29□□□□□ -2.04
VSX2P58304 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VSX2P58304 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.29□□□□□ -2.04
VSX2P58304 SNORA67.1-201ENST00000364749 141 ntBASIC2.29□□□□□ -2.04
VSX2P58304 MIR1284-201ENST00000408337 120 ntBASIC2.29□□□□□ -2.04
VSX2P58304 SPA17P1-201ENST00000416656 452 ntBASIC2.29□□□□□ -2.04
VSX2P58304 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.29□□□□□ -2.04
VSX2P58304 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.29□□□□□ -2.04
VSX2P58304 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.29□□□□□ -2.04
VSX2P58304 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.29□□□□□ -2.04
VSX2P58304 AL109741.2-201ENST00000455561 343 ntBASIC2.29□□□□□ -2.04
VSX2P58304 RNU6-420P-201ENST00000458780 107 ntBASIC2.29□□□□□ -2.04
VSX2P58304 AC073901.1-201ENST00000462471 408 ntBASIC2.29□□□□□ -2.04
VSX2P58304 AC133134.1-201ENST00000466800 359 ntBASIC2.29□□□□□ -2.04
VSX2P58304 TRBV12-1-201ENST00000479785 344 ntBASIC2.29□□□□□ -2.04
VSX2P58304 AC108729.1-201ENST00000487812 947 ntBASIC2.29□□□□□ -2.04
VSX2P58304 MTND3P3-201ENST00000505004 126 ntBASIC2.29□□□□□ -2.04
VSX2P58304 AC022447.3-201ENST00000506865 495 ntBASIC2.29□□□□□ -2.04
VSX2P58304 AC116353.3-201ENST00000511215 249 ntBASIC2.29□□□□□ -2.04
VSX2P58304 AC008413.1-201ENST00000511864 177 ntBASIC2.29□□□□□ -2.04
VSX2P58304 SCARNA15.2-201ENST00000516409 127 ntBASIC2.29□□□□□ -2.04
VSX2P58304 SNORA31.11-201ENST00000516528 139 ntBASIC2.29□□□□□ -2.04
VSX2P58304 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.29□□□□□ -2.04
VSX2P58304 AP003122.3-201ENST00000526316 255 ntBASIC2.29□□□□□ -2.04
VSX2P58304 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.29□□□□□ -2.04
VSX2P58304 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VSX2P58304 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.29□□□□□ -2.04
VSX2P58304 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.29□□□□□ -2.04
VSX2P58304 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.29□□□□□ -2.04
VSX2P58304 OR4K7P-201ENST00000580232 945 ntBASIC2.29□□□□□ -2.04
VSX2P58304 AL353997.4-201ENST00000586196 166 ntBASIC2.29□□□□□ -2.04
VSX2P58304 AC061975.8-201ENST00000587058 721 ntBASIC2.29□□□□□ -2.04
VSX2P58304 AC091057.3-201ENST00000602684 733 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms