Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.87□□□□□ -1.95
CDX1P47902 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.87□□□□□ -1.95
CDX1P47902 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.87□□□□□ -1.95
CDX1P47902 AC074050.1-201ENST00000563247 211 ntBASIC2.87□□□□□ -1.95
CDX1P47902 AC005771.1-201ENST00000585581 349 ntBASIC2.87□□□□□ -1.95
CDX1P47902 DUXAP4-201ENST00000603046 613 ntBASIC2.87□□□□□ -1.95
CDX1P47902 AC098826.3-201ENST00000603823 466 ntBASIC2.87□□□□□ -1.95
CDX1P47902 SEPT7P9-203ENST00000604116 343 ntBASIC2.87□□□□□ -1.95
CDX1P47902 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.87□□□□□ -1.95
CDX1P47902 AC004852.3-201ENST00000614131 326 ntBASIC2.87□□□□□ -1.95
CDX1P47902 AL158063.1-201ENST00000615349 536 ntBASIC2.87□□□□□ -1.95
CDX1P47902 Z69908.1-201ENST00000622603 247 ntBASIC2.87□□□□□ -1.95
CDX1P47902 AP000553.6-201ENST00000641242 118 ntBASIC2.87□□□□□ -1.95
CDX1P47902 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.87□□□□□ -1.95
CDX1P47902 AC007823.1-201ENST00000569932 1566 ntBASIC2.87□□□□□ -1.95
CDX1P47902 MTND5P29-201ENST00000458676 1807 ntBASIC2.86□□□□□ -1.95
CDX1P47902 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.86□□□□□ -1.95
CDX1P47902 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDX1P47902 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDX1P47902 AC103988.1-201ENST00000566382 2177 ntBASIC2.86□□□□□ -1.95
CDX1P47902 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CDX1P47902 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDX1P47902 RNU6-288P-201ENST00000363690 104 ntBASIC2.86□□□□□ -1.95
CDX1P47902 MIR670-201ENST00000390142 98 ntBASIC2.86□□□□□ -1.95
CDX1P47902 RPL23AP32-201ENST00000395315 459 ntBASIC2.86□□□□□ -1.95
CDX1P47902 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.86□□□□□ -1.95
CDX1P47902 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.86□□□□□ -1.95
CDX1P47902 SYF2P2-201ENST00000417620 583 ntBASIC2.86□□□□□ -1.95
CDX1P47902 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.86□□□□□ -1.95
CDX1P47902 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CDX1P47902 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.86□□□□□ -1.95
CDX1P47902 AC093106.2-201ENST00000428212 385 ntBASIC2.86□□□□□ -1.95
CDX1P47902 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.86□□□□□ -1.95
CDX1P47902 GPM6BP2-201ENST00000432046 144 ntBASIC2.86□□□□□ -1.95
CDX1P47902 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.86□□□□□ -1.95
CDX1P47902 GPM6BP1-201ENST00000446387 144 ntBASIC2.86□□□□□ -1.95
CDX1P47902 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.86□□□□□ -1.95
CDX1P47902 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.86□□□□□ -1.95
CDX1P47902 CECR9-201ENST00000453421 199 ntBASIC2.86□□□□□ -1.95
CDX1P47902 AC106707.2-201ENST00000484182 374 ntBASIC2.86□□□□□ -1.95
CDX1P47902 Y_RNA.695-201ENST00000516715 107 ntBASIC2.86□□□□□ -1.95
CDX1P47902 RNU6-1092P-201ENST00000516955 87 ntBASIC2.86□□□□□ -1.95
CDX1P47902 RNA5SP471-201ENST00000516971 106 ntBASIC2.86□□□□□ -1.95
CDX1P47902 SNORA31.21-201ENST00000517180 77 ntBASIC2.86□□□□□ -1.95
CDX1P47902 DUXAP2-201ENST00000519198 589 ntBASIC2.86□□□□□ -1.95
CDX1P47902 AC007991.1-201ENST00000522680 631 ntBASIC2.86□□□□□ -1.95
CDX1P47902 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.86□□□□□ -1.95
CDX1P47902 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.86□□□□□ -1.95
CDX1P47902 AC005951.1-201ENST00000576706 485 ntBASIC2.86□□□□□ -1.95
CDX1P47902 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.86□□□□□ -1.95
CDX1P47902 AC104763.2-201ENST00000604179 382 ntBASIC2.86□□□□□ -1.95
CDX1P47902 AL161798.1-201ENST00000604630 131 ntBASIC2.86□□□□□ -1.95
CDX1P47902 AC007363.1-201ENST00000604736 620 ntBASIC2.86□□□□□ -1.95
CDX1P47902 AC004805.2-201ENST00000605382 482 ntBASIC2.86□□□□□ -1.95
CDX1P47902 AC007619.2-201ENST00000605743 379 ntBASIC2.86□□□□□ -1.95
CDX1P47902 AC107294.1-201ENST00000609524 467 ntBASIC2.86□□□□□ -1.95
CDX1P47902 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.86□□□□□ -1.95
CDX1P47902 AC025594.3-201ENST00000613068 790 ntBASIC2.86□□□□□ -1.95
CDX1P47902 AP001506.1-201ENST00000615444 211 ntBASIC2.86□□□□□ -1.95
CDX1P47902 AC244100.1-202ENST00000621554 382 ntBASIC2.86□□□□□ -1.95
CDX1P47902 AC007998.5-201ENST00000622938 237 ntBASIC2.86□□□□□ -1.95
CDX1P47902 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDX1P47902 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.86□□□□□ -1.95
CDX1P47902 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CDX1P47902 MAPK10-322ENST00000641485 4530 ntBASIC2.86□□□□□ -1.95
CDX1P47902 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDX1P47902 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDX1P47902 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDX1P47902 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CDX1P47902 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.85□□□□□ -1.95
CDX1P47902 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDX1P47902 AC093908.1-201ENST00000623125 8092 ntBASIC2.85□□□□□ -1.95
CDX1P47902 FAM35CP-201ENST00000554755 2470 ntBASIC2.85□□□□□ -1.95
CDX1P47902 API5P2-201ENST00000397055 1498 ntBASIC2.85□□□□□ -1.95
CDX1P47902 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.85□□□□□ -1.95
CDX1P47902 RNA5SP51-201ENST00000364750 119 ntBASIC2.85□□□□□ -1.95
CDX1P47902 SNORD116-2-201ENST00000384274 95 ntBASIC2.85□□□□□ -1.95
CDX1P47902 SNORD116-6-201ENST00000384711 96 ntBASIC2.85□□□□□ -1.95
CDX1P47902 MIR7-3-201ENST00000384898 110 ntBASIC2.85□□□□□ -1.95
CDX1P47902 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.85□□□□□ -1.95
CDX1P47902 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.85□□□□□ -1.95
CDX1P47902 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.85□□□□□ -1.95
CDX1P47902 ISCA1P6-201ENST00000427740 390 ntBASIC2.85□□□□□ -1.95
CDX1P47902 ELOCP14-201ENST00000428070 331 ntBASIC2.85□□□□□ -1.95
CDX1P47902 AC244505.4-201ENST00000434905 287 ntBASIC2.85□□□□□ -1.95
CDX1P47902 SNRPEP9-201ENST00000436794 238 ntBASIC2.85□□□□□ -1.95
CDX1P47902 ELOCP7-201ENST00000439968 331 ntBASIC2.85□□□□□ -1.95
CDX1P47902 SSXP5-201ENST00000443473 287 ntBASIC2.85□□□□□ -1.95
CDX1P47902 PRDX3P3-201ENST00000447765 522 ntBASIC2.85□□□□□ -1.95
CDX1P47902 ST13P20-201ENST00000447996 1065 ntBASIC2.85□□□□□ -1.95
CDX1P47902 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.85□□□□□ -1.95
CDX1P47902 RNU6-953P-201ENST00000459154 107 ntBASIC2.85□□□□□ -1.95
CDX1P47902 SNORD42A-201ENST00000459584 64 ntBASIC2.85□□□□□ -1.95
CDX1P47902 AC080014.1-201ENST00000496877 1201 ntBASIC2.85□□□□□ -1.95
CDX1P47902 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.85□□□□□ -1.95
CDX1P47902 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.85□□□□□ -1.95
CDX1P47902 SNORA31.3-201ENST00000516029 96 ntBASIC2.85□□□□□ -1.95
CDX1P47902 RNA5SP208-201ENST00000516156 78 ntBASIC2.85□□□□□ -1.95
CDX1P47902 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.85□□□□□ -1.95
CDX1P47902 HMGB1P41-201ENST00000520234 440 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms