Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 Y_RNA.548-201ENST00000384656 105 ntBASIC4.07□□□□□ -1.76
COL15A1P39059 UBE2V1P2-201ENST00000397758 440 ntBASIC4.07□□□□□ -1.76
COL15A1P39059 AL139095.1-201ENST00000404326 391 ntBASIC4.07□□□□□ -1.76
COL15A1P39059 RNU4-55P-201ENST00000410731 137 ntBASIC4.07□□□□□ -1.76
COL15A1P39059 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.07□□□□□ -1.76
COL15A1P39059 AL356968.1-201ENST00000416622 474 ntBASIC4.07□□□□□ -1.76
COL15A1P39059 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.07□□□□□ -1.76
COL15A1P39059 DPPA2P1-201ENST00000428060 556 ntBASIC4.07□□□□□ -1.76
COL15A1P39059 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.07□□□□□ -1.76
COL15A1P39059 MTCO2P3-201ENST00000442543 421 ntBASIC4.07□□□□□ -1.76
COL15A1P39059 AL136380.1-201ENST00000447970 162 ntBASIC4.07□□□□□ -1.76
COL15A1P39059 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.07□□□□□ -1.76
COL15A1P39059 AC234775.1-201ENST00000454247 670 ntBASIC4.07□□□□□ -1.76
COL15A1P39059 HMGB1P25-201ENST00000468402 607 ntBASIC4.07□□□□□ -1.76
COL15A1P39059 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.07□□□□□ -1.76
COL15A1P39059 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.07□□□□□ -1.76
COL15A1P39059 AC017037.2-201ENST00000513850 890 ntBASIC4.07□□□□□ -1.76
COL15A1P39059 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.07□□□□□ -1.76
COL15A1P39059 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.07□□□□□ -1.76
COL15A1P39059 NDUFB9P3-201ENST00000521269 501 ntBASIC4.07□□□□□ -1.76
COL15A1P39059 AC135001.1-201ENST00000544546 283 ntBASIC4.07□□□□□ -1.76
COL15A1P39059 AL845331.3-202ENST00000562856 261 ntBASIC4.07□□□□□ -1.76
COL15A1P39059 MIR3146-201ENST00000580367 79 ntBASIC4.07□□□□□ -1.76
COL15A1P39059 MIR4425-201ENST00000580572 84 ntBASIC4.07□□□□□ -1.76
COL15A1P39059 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.07□□□□□ -1.76
COL15A1P39059 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.07□□□□□ -1.76
COL15A1P39059 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.07□□□□□ -1.76
COL15A1P39059 AL391813.2-201ENST00000609113 322 ntBASIC4.07□□□□□ -1.76
COL15A1P39059 RMST_8.1-201ENST00000610287 165 ntBASIC4.07□□□□□ -1.76
COL15A1P39059 AF117829.1-206ENST00000621883 3802 ntBASIC4.07□□□□□ -1.76
COL15A1P39059 AL137790.1-201ENST00000634283 177 ntBASIC4.07□□□□□ -1.76
COL15A1P39059 AC138649.5-201ENST00000637456 137 ntBASIC4.07□□□□□ -1.76
COL15A1P39059 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.07□□□□□ -1.76
COL15A1P39059 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
COL15A1P39059 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
COL15A1P39059 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
COL15A1P39059 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL15A1P39059 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.07□□□□□ -1.76
COL15A1P39059 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
COL15A1P39059 RNU5E-1-201ENST00000362477 120 ntBASIC4.06□□□□□ -1.76
COL15A1P39059 RNU6-1249P-201ENST00000363237 111 ntBASIC4.06□□□□□ -1.76
COL15A1P39059 SNORA5B-201ENST00000363786 132 ntBASIC4.06□□□□□ -1.76
COL15A1P39059 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.06□□□□□ -1.76
COL15A1P39059 RNU6-278P-201ENST00000390945 109 ntBASIC4.06□□□□□ -1.76
COL15A1P39059 Z98941.1-201ENST00000407764 100 ntBASIC4.06□□□□□ -1.76
COL15A1P39059 RHEBP3-201ENST00000411920 351 ntBASIC4.06□□□□□ -1.76
COL15A1P39059 RAC1P3-201ENST00000416129 580 ntBASIC4.06□□□□□ -1.76
COL15A1P39059 AC133104.1-201ENST00000429100 218 ntBASIC4.06□□□□□ -1.76
COL15A1P39059 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.06□□□□□ -1.76
COL15A1P39059 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.06□□□□□ -1.76
COL15A1P39059 AC079448.1-201ENST00000449377 373 ntBASIC4.06□□□□□ -1.76
COL15A1P39059 C1DP4-201ENST00000455429 424 ntBASIC4.06□□□□□ -1.76
COL15A1P39059 AL359385.1-201ENST00000456509 365 ntBASIC4.06□□□□□ -1.76
COL15A1P39059 AC007182.2-201ENST00000489251 402 ntBASIC4.06□□□□□ -1.76
COL15A1P39059 RNU6-718P-201ENST00000516166 105 ntBASIC4.06□□□□□ -1.76
COL15A1P39059 RNU6-798P-201ENST00000516912 103 ntBASIC4.06□□□□□ -1.76
COL15A1P39059 RNU6-528P-201ENST00000516926 100 ntBASIC4.06□□□□□ -1.76
COL15A1P39059 SCARNA20.6-201ENST00000517251 106 ntBASIC4.06□□□□□ -1.76
COL15A1P39059 AC107934.1-201ENST00000522215 217 ntBASIC4.06□□□□□ -1.76
COL15A1P39059 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.06□□□□□ -1.76
COL15A1P39059 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.06□□□□□ -1.76
COL15A1P39059 COX6CP3-201ENST00000580869 223 ntBASIC4.06□□□□□ -1.76
COL15A1P39059 BDH2P1-201ENST00000602288 736 ntBASIC4.06□□□□□ -1.76
COL15A1P39059 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.06□□□□□ -1.76
COL15A1P39059 uc_338.25-201ENST00000613756 156 ntBASIC4.06□□□□□ -1.76
COL15A1P39059 AC090517.2-201ENST00000614966 680 ntBASIC4.06□□□□□ -1.76
COL15A1P39059 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.06□□□□□ -1.76
COL15A1P39059 AL356585.4-201ENST00000623078 1229 ntBASIC4.06□□□□□ -1.76
COL15A1P39059 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL15A1P39059 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL15A1P39059 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL15A1P39059 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
COL15A1P39059 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.05□□□□□ -1.76
COL15A1P39059 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
COL15A1P39059 SNORA20.2-201ENST00000383922 131 ntBASIC4.05□□□□□ -1.76
COL15A1P39059 BTF3P7-201ENST00000407097 488 ntBASIC4.05□□□□□ -1.76
COL15A1P39059 MTND1P23-201ENST00000416931 372 ntBASIC4.05□□□□□ -1.76
COL15A1P39059 ELOCP4-201ENST00000420090 333 ntBASIC4.05□□□□□ -1.76
COL15A1P39059 AL137014.1-201ENST00000420490 1226 ntBASIC4.05□□□□□ -1.76
COL15A1P39059 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.05□□□□□ -1.76
COL15A1P39059 AC073464.1-201ENST00000429823 534 ntBASIC4.05□□□□□ -1.76
COL15A1P39059 AL139415.2-201ENST00000431968 163 ntBASIC4.05□□□□□ -1.76
COL15A1P39059 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.05□□□□□ -1.76
COL15A1P39059 UBE2V1P8-201ENST00000437166 265 ntBASIC4.05□□□□□ -1.76
COL15A1P39059 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.05□□□□□ -1.76
COL15A1P39059 snoU13.3-201ENST00000459441 104 ntBASIC4.05□□□□□ -1.76
COL15A1P39059 AC114967.1-201ENST00000504890 259 ntBASIC4.05□□□□□ -1.76
COL15A1P39059 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.05□□□□□ -1.76
COL15A1P39059 HMGB1P29-201ENST00000505659 499 ntBASIC4.05□□□□□ -1.76
COL15A1P39059 FAM92A1P1-201ENST00000528023 890 ntBASIC4.05□□□□□ -1.76
COL15A1P39059 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.05□□□□□ -1.76
COL15A1P39059 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.05□□□□□ -1.76
COL15A1P39059 AL034351.1-201ENST00000605288 668 ntBASIC4.05□□□□□ -1.76
COL15A1P39059 AC007038.2-201ENST00000608095 740 ntBASIC4.05□□□□□ -1.76
COL15A1P39059 TUG1_1.1-201ENST00000610654 145 ntBASIC4.05□□□□□ -1.76
COL15A1P39059 AL157786.1-207ENST00000627771 695 ntBASIC4.05□□□□□ -1.76
COL15A1P39059 AC073476.4-201ENST00000628409 72 ntBASIC4.05□□□□□ -1.76
COL15A1P39059 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.05□□□□□ -1.76
COL15A1P39059 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL15A1P39059 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms