Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CNGA1P29973 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.48□□□□□ -1.69
CNGA1P29973 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.48□□□□□ -1.69
CNGA1P29973 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.48□□□□□ -1.69
CNGA1P29973 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CNGA1P29973 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CNGA1P29973 RNU6-50P-201ENST00000362356 103 ntBASIC4.48□□□□□ -1.69
CNGA1P29973 DEFB109C-201ENST00000382575 264 ntBASIC4.48□□□□□ -1.69
CNGA1P29973 DEFB109B-201ENST00000382656 264 ntBASIC4.48□□□□□ -1.69
CNGA1P29973 Y_RNA.453-201ENST00000384223 109 ntBASIC4.48□□□□□ -1.69
CNGA1P29973 MIR3074-201ENST00000384885 81 ntBASIC4.48□□□□□ -1.69
CNGA1P29973 SOD2P1-201ENST00000396543 562 ntBASIC4.48□□□□□ -1.69
CNGA1P29973 SNORA11.2-201ENST00000408318 127 ntBASIC4.48□□□□□ -1.69
CNGA1P29973 AL035423.1-201ENST00000420331 213 ntBASIC4.48□□□□□ -1.69
CNGA1P29973 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.48□□□□□ -1.69
CNGA1P29973 MTND1P2-201ENST00000430604 821 ntBASIC4.48□□□□□ -1.69
CNGA1P29973 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.48□□□□□ -1.69
CNGA1P29973 PRDX3P3-201ENST00000447765 522 ntBASIC4.48□□□□□ -1.69
CNGA1P29973 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.48□□□□□ -1.69
CNGA1P29973 AC092989.1-201ENST00000481235 277 ntBASIC4.48□□□□□ -1.69
CNGA1P29973 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.48□□□□□ -1.69
CNGA1P29973 FAM92A1P2-202ENST00000504766 877 ntBASIC4.48□□□□□ -1.69
CNGA1P29973 AC017037.1-201ENST00000508460 471 ntBASIC4.48□□□□□ -1.69
CNGA1P29973 AC108078.2-201ENST00000510750 236 ntBASIC4.48□□□□□ -1.69
CNGA1P29973 AC074250.1-201ENST00000511117 192 ntBASIC4.48□□□□□ -1.69
CNGA1P29973 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.48□□□□□ -1.69
CNGA1P29973 RNU6-927P-201ENST00000516199 100 ntBASIC4.48□□□□□ -1.69
CNGA1P29973 AC103843.2-201ENST00000530523 682 ntBASIC4.48□□□□□ -1.69
CNGA1P29973 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.48□□□□□ -1.69
CNGA1P29973 AC034105.3-201ENST00000565294 442 ntBASIC4.48□□□□□ -1.69
CNGA1P29973 AL360157.1-201ENST00000565962 87 ntBASIC4.48□□□□□ -1.69
CNGA1P29973 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.48□□□□□ -1.69
CNGA1P29973 AL162413.1-201ENST00000603198 110 ntBASIC4.48□□□□□ -1.69
CNGA1P29973 AC004825.2-201ENST00000616634 455 ntBASIC4.48□□□□□ -1.69
CNGA1P29973 AC025034.2-201ENST00000623264 286 ntBASIC4.48□□□□□ -1.69
CNGA1P29973 AC073346.2-201ENST00000624724 2058 ntBASIC4.48□□□□□ -1.69
CNGA1P29973 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CNGA1P29973 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CNGA1P29973 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
CNGA1P29973 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.48□□□□□ -1.69
CNGA1P29973 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CNGA1P29973 AC006020.1-201ENST00000420179 1854 ntBASIC4.47□□□□□ -1.69
CNGA1P29973 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CNGA1P29973 MARK2P15-201ENST00000432204 2186 ntBASIC4.47□□□□□ -1.69
CNGA1P29973 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.47□□□□□ -1.69
CNGA1P29973 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CNGA1P29973 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CNGA1P29973 RNA5SP72-201ENST00000364442 117 ntBASIC4.47□□□□□ -1.69
CNGA1P29973 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CNGA1P29973 RNU6-817P-201ENST00000391083 104 ntBASIC4.47□□□□□ -1.69
CNGA1P29973 AL591416.1-201ENST00000404015 867 ntBASIC4.47□□□□□ -1.69
CNGA1P29973 RNU6-908P-201ENST00000410160 94 ntBASIC4.47□□□□□ -1.69
CNGA1P29973 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.47□□□□□ -1.69
CNGA1P29973 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.47□□□□□ -1.69
CNGA1P29973 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.47□□□□□ -1.69
CNGA1P29973 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.47□□□□□ -1.69
CNGA1P29973 AL356867.1-201ENST00000429623 299 ntBASIC4.47□□□□□ -1.69
CNGA1P29973 HSPD1P21-201ENST00000436541 245 ntBASIC4.47□□□□□ -1.69
CNGA1P29973 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.47□□□□□ -1.69
CNGA1P29973 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.47□□□□□ -1.69
CNGA1P29973 CACYBPP2-201ENST00000453625 678 ntBASIC4.47□□□□□ -1.69
CNGA1P29973 AC006512.1-201ENST00000468816 291 ntBASIC4.47□□□□□ -1.69
CNGA1P29973 AC233702.1-201ENST00000482905 502 ntBASIC4.47□□□□□ -1.69
CNGA1P29973 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.47□□□□□ -1.69
CNGA1P29973 AC104619.4-201ENST00000510773 249 ntBASIC4.47□□□□□ -1.69
CNGA1P29973 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.47□□□□□ -1.69
CNGA1P29973 AC105417.1-201ENST00000514691 285 ntBASIC4.47□□□□□ -1.69
CNGA1P29973 RNU6-1256P-201ENST00000516539 103 ntBASIC4.47□□□□□ -1.69
CNGA1P29973 OR5AL2P-201ENST00000532185 920 ntBASIC4.47□□□□□ -1.69
CNGA1P29973 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.47□□□□□ -1.69
CNGA1P29973 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.47□□□□□ -1.69
CNGA1P29973 AC004024.1-201ENST00000549244 247 ntBASIC4.47□□□□□ -1.69
CNGA1P29973 AC007424.1-203ENST00000554613 687 ntBASIC4.47□□□□□ -1.69
CNGA1P29973 AC037471.2-201ENST00000564941 598 ntBASIC4.47□□□□□ -1.69
CNGA1P29973 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.47□□□□□ -1.69
CNGA1P29973 AC174048.1-201ENST00000603389 144 ntBASIC4.47□□□□□ -1.69
CNGA1P29973 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.47□□□□□ -1.69
CNGA1P29973 U3.45-201ENST00000607547 219 ntBASIC4.47□□□□□ -1.69
CNGA1P29973 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.47□□□□□ -1.69
CNGA1P29973 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.47□□□□□ -1.69
CNGA1P29973 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.47□□□□□ -1.69
CNGA1P29973 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.47□□□□□ -1.69
CNGA1P29973 AL133383.2-201ENST00000622958 2336 ntBASIC4.47□□□□□ -1.69
CNGA1P29973 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CNGA1P29973 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.47□□□□□ -1.69
CNGA1P29973 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CNGA1P29973 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.46□□□□□ -1.69
CNGA1P29973 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CNGA1P29973 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CNGA1P29973 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.46□□□□□ -1.7
CNGA1P29973 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
CNGA1P29973 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.46□□□□□ -1.7
CNGA1P29973 Y_RNA.89-201ENST00000363031 102 ntBASIC4.46□□□□□ -1.7
CNGA1P29973 RNU6-534P-201ENST00000364877 106 ntBASIC4.46□□□□□ -1.7
CNGA1P29973 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.46□□□□□ -1.7
CNGA1P29973 SNORA69-201ENST00000383895 132 ntBASIC4.46□□□□□ -1.7
CNGA1P29973 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.46□□□□□ -1.7
CNGA1P29973 SYF2P2-201ENST00000417620 583 ntBASIC4.46□□□□□ -1.7
CNGA1P29973 AL139247.1-201ENST00000422768 325 ntBASIC4.46□□□□□ -1.7
CNGA1P29973 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms