Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL365400.1-201ENST00000431854 640 ntBASIC1.74□□□□□ -2.13
COL4A5P29400 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A5P29400 AL031183.1-201ENST00000457667 207 ntBASIC1.74□□□□□ -2.13
COL4A5P29400 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.74□□□□□ -2.13
COL4A5P29400 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.74□□□□□ -2.13
COL4A5P29400 RN7SKP49-201ENST00000516675 260 ntBASIC1.74□□□□□ -2.13
COL4A5P29400 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A5P29400 NOP56P3-201ENST00000549457 385 ntBASIC1.74□□□□□ -2.13
COL4A5P29400 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A5P29400 AC087481.2-201ENST00000565492 330 ntBASIC1.74□□□□□ -2.13
COL4A5P29400 AL356118.1-201ENST00000635272 1078 ntBASIC1.74□□□□□ -2.13
COL4A5P29400 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL4A5P29400 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
COL4A5P29400 MTCO1P18-201ENST00000455518 1419 ntBASIC1.73□□□□□ -2.13
COL4A5P29400 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
COL4A5P29400 ENSAP3-201ENST00000312710 333 ntBASIC1.73□□□□□ -2.13
COL4A5P29400 RNA5SP258-201ENST00000362750 119 ntBASIC1.73□□□□□ -2.13
COL4A5P29400 CD24P4-201ENST00000382840 243 ntBASIC1.73□□□□□ -2.13
COL4A5P29400 RNU6-40P-201ENST00000384254 107 ntBASIC1.73□□□□□ -2.13
COL4A5P29400 AL133384.1-201ENST00000412744 351 ntBASIC1.73□□□□□ -2.13
COL4A5P29400 HMGN1P33-201ENST00000432945 451 ntBASIC1.73□□□□□ -2.13
COL4A5P29400 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.73□□□□□ -2.13
COL4A5P29400 AC004022.1-201ENST00000447766 1066 ntBASIC1.73□□□□□ -2.13
COL4A5P29400 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.73□□□□□ -2.13
COL4A5P29400 SNORD121B-201ENST00000458838 81 ntBASIC1.73□□□□□ -2.13
COL4A5P29400 RNA5SP82-201ENST00000516707 92 ntBASIC1.73□□□□□ -2.13
COL4A5P29400 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.73□□□□□ -2.13
COL4A5P29400 AC124293.1-201ENST00000530034 493 ntBASIC1.73□□□□□ -2.13
COL4A5P29400 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
COL4A5P29400 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.73□□□□□ -2.13
COL4A5P29400 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.73□□□□□ -2.13
COL4A5P29400 AC024614.2-201ENST00000577584 372 ntBASIC1.73□□□□□ -2.13
COL4A5P29400 COX6CP3-201ENST00000580869 223 ntBASIC1.73□□□□□ -2.13
COL4A5P29400 AC005730.3-201ENST00000583067 366 ntBASIC1.73□□□□□ -2.13
COL4A5P29400 AC011712.1-201ENST00000588959 234 ntBASIC1.73□□□□□ -2.13
COL4A5P29400 AL391646.1-201ENST00000603860 190 ntBASIC1.73□□□□□ -2.13
COL4A5P29400 AP001330.4-201ENST00000604350 154 ntBASIC1.73□□□□□ -2.13
COL4A5P29400 AC012493.3-201ENST00000604494 112 ntBASIC1.73□□□□□ -2.13
COL4A5P29400 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.73□□□□□ -2.13
COL4A5P29400 AC112503.2-201ENST00000609005 552 ntBASIC1.73□□□□□ -2.13
COL4A5P29400 AC090617.9-201ENST00000623751 147 ntBASIC1.73□□□□□ -2.13
COL4A5P29400 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
COL4A5P29400 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
COL4A5P29400 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
COL4A5P29400 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
COL4A5P29400 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
COL4A5P29400 Y_RNA.493-201ENST00000384422 102 ntBASIC1.72□□□□□ -2.13
COL4A5P29400 RNU6-441P-201ENST00000384545 106 ntBASIC1.72□□□□□ -2.13
COL4A5P29400 RNU6-77P-201ENST00000410554 91 ntBASIC1.72□□□□□ -2.13
COL4A5P29400 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.72□□□□□ -2.13
COL4A5P29400 AL606495.1-201ENST00000422100 813 ntBASIC1.72□□□□□ -2.13
COL4A5P29400 MTND4P24-201ENST00000424002 397 ntBASIC1.72□□□□□ -2.13
COL4A5P29400 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.72□□□□□ -2.13
COL4A5P29400 RPS6P15-201ENST00000431996 751 ntBASIC1.72□□□□□ -2.13
COL4A5P29400 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.72□□□□□ -2.13
COL4A5P29400 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.72□□□□□ -2.13
COL4A5P29400 snoU109.4-201ENST00000458953 143 ntBASIC1.72□□□□□ -2.13
COL4A5P29400 MTCYBP18-201ENST00000501056 747 ntBASIC1.72□□□□□ -2.13
COL4A5P29400 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.72□□□□□ -2.13
COL4A5P29400 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.72□□□□□ -2.13
COL4A5P29400 MIR151B-201ENST00000584249 96 ntBASIC1.72□□□□□ -2.13
COL4A5P29400 AC013468.1-201ENST00000608680 598 ntBASIC1.72□□□□□ -2.13
COL4A5P29400 AC106028.5-201ENST00000610332 395 ntBASIC1.72□□□□□ -2.13
COL4A5P29400 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.72□□□□□ -2.13
COL4A5P29400 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.72□□□□□ -2.13
COL4A5P29400 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
COL4A5P29400 HSPE1P11-201ENST00000339579 310 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.71□□□□□ -2.14
COL4A5P29400 MIR625-201ENST00000385047 85 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 RPL36P19-201ENST00000430744 301 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.71□□□□□ -2.14
COL4A5P29400 MTND1P33-201ENST00000446251 917 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.71□□□□□ -2.14
COL4A5P29400 NAP1L1P3-201ENST00000462291 880 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 AC090515.1-201ENST00000465295 476 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 CABYRP1-201ENST00000465493 1045 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 AC034222.1-201ENST00000494052 532 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 HIGD1AP6-201ENST00000521833 279 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 AC087272.1-201ENST00000523624 533 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 OSBPL9P3-201ENST00000534523 595 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.71□□□□□ -2.14
COL4A5P29400 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.71□□□□□ -2.14
COL4A5P29400 AC233266.2-201ENST00000567067 528 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 AL669831.4-202ENST00000590817 238 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.71□□□□□ -2.14
COL4A5P29400 VN1R88P-201ENST00000596787 292 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
COL4A5P29400 AC092608.3-201ENST00000625017 386 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.71□□□□□ -2.14
COL4A5P29400 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
COL4A5P29400 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.71□□□□□ -2.14
COL4A5P29400 RNU6-821P-201ENST00000390995 107 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.71□□□□□ -2.14
COL4A5P29400 ZNF92P1Y-201ENST00000415010 1191 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 AC233728.2-201ENST00000425348 757 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.71□□□□□ -2.14
COL4A5P29400 GTF2IP7-202ENST00000436677 309 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.71□□□□□ -2.14
COL4A5P29400 AC015908.1-201ENST00000478739 476 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 RPL30P14-201ENST00000482744 348 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms