Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.38□□□□□ -1.55
RXRBP28702 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
RXRBP28702 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.38□□□□□ -1.55
RXRBP28702 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RXRBP28702 RNU6-601P-201ENST00000384540 107 ntBASIC5.38□□□□□ -1.55
RXRBP28702 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RXRBP28702 RNA5SP120-201ENST00000410900 112 ntBASIC5.38□□□□□ -1.55
RXRBP28702 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.38□□□□□ -1.55
RXRBP28702 AC104333.2-201ENST00000422630 192 ntBASIC5.38□□□□□ -1.55
RXRBP28702 AL139247.1-201ENST00000422768 325 ntBASIC5.38□□□□□ -1.55
RXRBP28702 AC093151.1-201ENST00000427711 313 ntBASIC5.38□□□□□ -1.55
RXRBP28702 FTH1P1-201ENST00000437933 532 ntBASIC5.38□□□□□ -1.55
RXRBP28702 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.38□□□□□ -1.55
RXRBP28702 RPS11P1-201ENST00000451072 473 ntBASIC5.38□□□□□ -1.55
RXRBP28702 AC002553.2-201ENST00000453217 340 ntBASIC5.38□□□□□ -1.55
RXRBP28702 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.38□□□□□ -1.55
RXRBP28702 AL133162.1-201ENST00000463228 453 ntBASIC5.38□□□□□ -1.55
RXRBP28702 AC079140.5-201ENST00000507882 310 ntBASIC5.38□□□□□ -1.55
RXRBP28702 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC5.38□□□□□ -1.55
RXRBP28702 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.38□□□□□ -1.55
RXRBP28702 HMGB1P41-201ENST00000520234 440 ntBASIC5.38□□□□□ -1.55
RXRBP28702 AC007991.1-201ENST00000522680 631 ntBASIC5.38□□□□□ -1.55
RXRBP28702 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.38□□□□□ -1.55
RXRBP28702 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.38□□□□□ -1.55
RXRBP28702 AC006064.5-201ENST00000541782 248 ntBASIC5.38□□□□□ -1.55
RXRBP28702 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.38□□□□□ -1.55
RXRBP28702 AC060771.1-201ENST00000582031 164 ntBASIC5.38□□□□□ -1.55
RXRBP28702 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RXRBP28702 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.38□□□□□ -1.55
RXRBP28702 AC104695.3-201ENST00000604052 296 ntBASIC5.38□□□□□ -1.55
RXRBP28702 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RXRBP28702 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RXRBP28702 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
RXRBP28702 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RXRBP28702 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
RXRBP28702 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
RXRBP28702 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
RXRBP28702 AC107081.3-201ENST00000612715 2034 ntBASIC5.38□□□□□ -1.55
RXRBP28702 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
RXRBP28702 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RXRBP28702 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RXRBP28702 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.37□□□□□ -1.55
RXRBP28702 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RXRBP28702 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.37□□□□□ -1.55
RXRBP28702 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RXRBP28702 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
RXRBP28702 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.37□□□□□ -1.55
RXRBP28702 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RXRBP28702 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
RXRBP28702 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.37□□□□□ -1.55
RXRBP28702 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RXRBP28702 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.37□□□□□ -1.55
RXRBP28702 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
RXRBP28702 Y_RNA.455-201ENST00000384230 98 ntBASIC5.37□□□□□ -1.55
RXRBP28702 MIR490-201ENST00000384865 128 ntBASIC5.37□□□□□ -1.55
RXRBP28702 SOD2P1-201ENST00000396543 562 ntBASIC5.37□□□□□ -1.55
RXRBP28702 AC080125.1-201ENST00000414888 684 ntBASIC5.37□□□□□ -1.55
RXRBP28702 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.37□□□□□ -1.55
RXRBP28702 ATG3P1-201ENST00000419507 911 ntBASIC5.37□□□□□ -1.55
RXRBP28702 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.37□□□□□ -1.55
RXRBP28702 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.37□□□□□ -1.55
RXRBP28702 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RXRBP28702 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC5.37□□□□□ -1.55
RXRBP28702 AC116562.3-201ENST00000506136 177 ntBASIC5.37□□□□□ -1.55
RXRBP28702 AC068587.5-201ENST00000528506 175 ntBASIC5.37□□□□□ -1.55
RXRBP28702 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.37□□□□□ -1.55
RXRBP28702 AC245517.5-201ENST00000611529 162 ntBASIC5.37□□□□□ -1.55
RXRBP28702 PLCE1P1-201ENST00000622094 305 ntBASIC5.37□□□□□ -1.55
RXRBP28702 AC243312.2-201ENST00000623340 601 ntBASIC5.37□□□□□ -1.55
RXRBP28702 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RXRBP28702 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.37□□□□□ -1.55
RXRBP28702 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RXRBP28702 KPNA2P1-201ENST00000458289 1591 ntBASIC5.37□□□□□ -1.55
RXRBP28702 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC5.37□□□□□ -1.55
RXRBP28702 AL121839.2-201ENST00000565058 6943 ntBASIC5.37□□□□□ -1.55
RXRBP28702 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RXRBP28702 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RXRBP28702 SRP72P2-201ENST00000344851 1979 ntBASIC5.36□□□□□ -1.55
RXRBP28702 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.36□□□□□ -1.55
RXRBP28702 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RXRBP28702 RNU6-238P-201ENST00000363313 106 ntBASIC5.36□□□□□ -1.55
RXRBP28702 Y_RNA.234-201ENST00000364409 97 ntBASIC5.36□□□□□ -1.55
RXRBP28702 RNU6-890P-201ENST00000384121 107 ntBASIC5.36□□□□□ -1.55
RXRBP28702 AL023807.1-201ENST00000407932 359 ntBASIC5.36□□□□□ -1.55
RXRBP28702 RNU2-64P-201ENST00000411315 191 ntBASIC5.36□□□□□ -1.55
RXRBP28702 RPL7P10-201ENST00000417407 739 ntBASIC5.36□□□□□ -1.55
RXRBP28702 AL139396.1-201ENST00000421137 167 ntBASIC5.36□□□□□ -1.55
RXRBP28702 AL591419.1-201ENST00000427423 339 ntBASIC5.36□□□□□ -1.55
RXRBP28702 AL590233.1-201ENST00000430017 456 ntBASIC5.36□□□□□ -1.55
RXRBP28702 AL354710.1-201ENST00000453641 246 ntBASIC5.36□□□□□ -1.55
RXRBP28702 DCLRE1CP1-201ENST00000454630 470 ntBASIC5.36□□□□□ -1.55
RXRBP28702 AC068781.1-201ENST00000488231 618 ntBASIC5.36□□□□□ -1.55
RXRBP28702 AC018797.3-201ENST00000513388 1241 ntBASIC5.36□□□□□ -1.55
RXRBP28702 HIGD1AP3-201ENST00000515857 278 ntBASIC5.36□□□□□ -1.55
RXRBP28702 RN7SKP96-201ENST00000516948 297 ntBASIC5.36□□□□□ -1.55
RXRBP28702 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.36□□□□□ -1.55
RXRBP28702 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC5.36□□□□□ -1.55
RXRBP28702 MTND4P7-201ENST00000523876 130 ntBASIC5.36□□□□□ -1.55
RXRBP28702 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.36□□□□□ -1.55
RXRBP28702 EIF4BP1-201ENST00000554881 351 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms