Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RNU1-86P-201ENST00000516108 154 ntBASIC3.98□□□□□ -1.77
CD40P25942 RNU2-58P-201ENST00000516403 183 ntBASIC3.98□□□□□ -1.77
CD40P25942 RNU1-107P-201ENST00000516617 154 ntBASIC3.98□□□□□ -1.77
CD40P25942 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CD40P25942 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.98□□□□□ -1.77
CD40P25942 AL352979.3-201ENST00000553515 247 ntBASIC3.98□□□□□ -1.77
CD40P25942 TRAV37-201ENST00000553906 342 ntBASIC3.98□□□□□ -1.77
CD40P25942 TRAV28-201ENST00000557548 323 ntBASIC3.98□□□□□ -1.77
CD40P25942 HSPE1P5-201ENST00000561489 272 ntBASIC3.98□□□□□ -1.77
CD40P25942 AL356218.2-201ENST00000605264 187 ntBASIC3.98□□□□□ -1.77
CD40P25942 RNU6-85P-201ENST00000605989 107 ntBASIC3.98□□□□□ -1.77
CD40P25942 Y_RNA.812-201ENST00000610788 101 ntBASIC3.98□□□□□ -1.77
CD40P25942 AC005344.1-201ENST00000613391 459 ntBASIC3.98□□□□□ -1.77
CD40P25942 Y_RNA.784-201ENST00000613803 101 ntBASIC3.98□□□□□ -1.77
CD40P25942 Y_RNA.787-201ENST00000616522 101 ntBASIC3.98□□□□□ -1.77
CD40P25942 Y_RNA.780-201ENST00000617336 101 ntBASIC3.98□□□□□ -1.77
CD40P25942 Y_RNA.801-201ENST00000619005 101 ntBASIC3.98□□□□□ -1.77
CD40P25942 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC3.98□□□□□ -1.77
CD40P25942 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.98□□□□□ -1.77
CD40P25942 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CD40P25942 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CD40P25942 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CD40P25942 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.97□□□□□ -1.77
CD40P25942 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CD40P25942 AC007785.2-201ENST00000598627 1916 ntBASIC3.97□□□□□ -1.77
CD40P25942 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.97□□□□□ -1.77
CD40P25942 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.97□□□□□ -1.77
CD40P25942 RAD17P1-201ENST00000418130 2042 ntBASIC3.97□□□□□ -1.77
CD40P25942 MAPK10-349ENST00000641767 3661 ntBASIC3.97□□□□□ -1.77
CD40P25942 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.97□□□□□ -1.77
CD40P25942 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.97□□□□□ -1.77
CD40P25942 RNA5SP447-201ENST00000363749 119 ntBASIC3.97□□□□□ -1.77
CD40P25942 RNU6-95P-201ENST00000384697 107 ntBASIC3.97□□□□□ -1.77
CD40P25942 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CD40P25942 ELOCP19-201ENST00000411919 318 ntBASIC3.97□□□□□ -1.77
CD40P25942 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.97□□□□□ -1.77
CD40P25942 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.97□□□□□ -1.77
CD40P25942 C4BPAP2-201ENST00000428434 478 ntBASIC3.97□□□□□ -1.77
CD40P25942 RPL30P15-201ENST00000457129 321 ntBASIC3.97□□□□□ -1.77
CD40P25942 RNU7-152P-201ENST00000458982 64 ntBASIC3.97□□□□□ -1.77
CD40P25942 Y_RNA.653-201ENST00000459091 95 ntBASIC3.97□□□□□ -1.77
CD40P25942 AC096745.1-201ENST00000509945 370 ntBASIC3.97□□□□□ -1.77
CD40P25942 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.97□□□□□ -1.77
CD40P25942 AC020661.2-201ENST00000560114 134 ntBASIC3.97□□□□□ -1.77
CD40P25942 MIR4277-201ENST00000578298 84 ntBASIC3.97□□□□□ -1.77
CD40P25942 AC093227.2-201ENST00000589357 285 ntBASIC3.97□□□□□ -1.77
CD40P25942 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CD40P25942 MIR6810-201ENST00000622701 70 ntBASIC3.97□□□□□ -1.77
CD40P25942 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CD40P25942 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CD40P25942 AL731566.1-201ENST00000620490 1937 ntBASIC3.97□□□□□ -1.77
CD40P25942 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC3.97□□□□□ -1.77
CD40P25942 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CD40P25942 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CD40P25942 AC116096.1-201ENST00000566804 2314 ntBASIC3.96□□□□□ -1.77
CD40P25942 AL731532.2-201ENST00000623542 1953 ntBASIC3.96□□□□□ -1.77
CD40P25942 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CD40P25942 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CD40P25942 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CD40P25942 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CD40P25942 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CD40P25942 NCAPGP1-201ENST00000505112 1814 ntBASIC3.96□□□□□ -1.78
CD40P25942 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD40P25942 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD40P25942 Y_RNA.324-201ENST00000365165 102 ntBASIC3.96□□□□□ -1.78
CD40P25942 SNORA62-201ENST00000365493 153 ntBASIC3.96□□□□□ -1.78
CD40P25942 SNORD42.2-201ENST00000365570 69 ntBASIC3.96□□□□□ -1.78
CD40P25942 DEFB109C-201ENST00000382575 264 ntBASIC3.96□□□□□ -1.78
CD40P25942 DEFB109B-201ENST00000382656 264 ntBASIC3.96□□□□□ -1.78
CD40P25942 U3.22-201ENST00000391120 215 ntBASIC3.96□□□□□ -1.78
CD40P25942 RNU6-954P-201ENST00000411355 107 ntBASIC3.96□□□□□ -1.78
CD40P25942 AC245054.2-201ENST00000415639 319 ntBASIC3.96□□□□□ -1.78
CD40P25942 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.96□□□□□ -1.78
CD40P25942 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.96□□□□□ -1.78
CD40P25942 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.96□□□□□ -1.78
CD40P25942 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.96□□□□□ -1.78
CD40P25942 Z82210.1-201ENST00000440037 231 ntBASIC3.96□□□□□ -1.78
CD40P25942 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CD40P25942 ISCUP1-201ENST00000454451 448 ntBASIC3.96□□□□□ -1.78
CD40P25942 CYCSP34-201ENST00000458172 304 ntBASIC3.96□□□□□ -1.78
CD40P25942 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.96□□□□□ -1.78
CD40P25942 AC020890.1-201ENST00000491837 504 ntBASIC3.96□□□□□ -1.78
CD40P25942 AC116337.1-201ENST00000509680 687 ntBASIC3.96□□□□□ -1.78
CD40P25942 AC092436.3-201ENST00000511788 257 ntBASIC3.96□□□□□ -1.78
CD40P25942 AC015795.1-201ENST00000513669 327 ntBASIC3.96□□□□□ -1.78
CD40P25942 AC093303.1-201ENST00000514549 295 ntBASIC3.96□□□□□ -1.78
CD40P25942 MIR892C-201ENST00000516410 77 ntBASIC3.96□□□□□ -1.78
CD40P25942 RNU6-1016P-201ENST00000516689 94 ntBASIC3.96□□□□□ -1.78
CD40P25942 RNA5SP468-201ENST00000516782 93 ntBASIC3.96□□□□□ -1.78
CD40P25942 RNU6-1213P-201ENST00000517075 94 ntBASIC3.96□□□□□ -1.78
CD40P25942 RNA5SP165-201ENST00000517142 115 ntBASIC3.96□□□□□ -1.78
CD40P25942 RNU1-54P-201ENST00000517181 120 ntBASIC3.96□□□□□ -1.78
CD40P25942 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.96□□□□□ -1.78
CD40P25942 AC104576.1-201ENST00000524225 88 ntBASIC3.96□□□□□ -1.78
CD40P25942 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.96□□□□□ -1.78
CD40P25942 MIR5690-201ENST00000583739 73 ntBASIC3.96□□□□□ -1.78
CD40P25942 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.96□□□□□ -1.78
CD40P25942 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC3.96□□□□□ -1.78
CD40P25942 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.96□□□□□ -1.78
CD40P25942 AC078795.3-201ENST00000602913 472 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms