Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC091812.1-201ENST00000432235 1948 ntBASIC1.15□□□□□ -2.22
HMGA1P17096 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.15□□□□□ -2.23
HMGA1P17096 AL137003.2-201ENST00000606924 2538 ntBASIC1.15□□□□□ -2.23
HMGA1P17096 Y_RNA.224-201ENST00000364308 111 ntBASIC1.15□□□□□ -2.23
HMGA1P17096 RNU4-42P-201ENST00000364738 142 ntBASIC1.15□□□□□ -2.23
HMGA1P17096 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.15□□□□□ -2.23
HMGA1P17096 AC092745.2-202ENST00000411880 369 ntBASIC1.15□□□□□ -2.23
HMGA1P17096 HMGB1P49-201ENST00000418882 569 ntBASIC1.15□□□□□ -2.23
HMGA1P17096 MTCYBP24-201ENST00000420387 1106 ntBASIC1.15□□□□□ -2.23
HMGA1P17096 RPL7P30-201ENST00000420888 709 ntBASIC1.15□□□□□ -2.23
HMGA1P17096 HSPE1P21-201ENST00000438283 308 ntBASIC1.15□□□□□ -2.23
HMGA1P17096 MTND1P18-201ENST00000448191 573 ntBASIC1.15□□□□□ -2.23
HMGA1P17096 AC087343.1-201ENST00000477341 475 ntBASIC1.15□□□□□ -2.23
HMGA1P17096 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.15□□□□□ -2.23
HMGA1P17096 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.15□□□□□ -2.23
HMGA1P17096 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.15□□□□□ -2.23
HMGA1P17096 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.15□□□□□ -2.23
HMGA1P17096 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.15□□□□□ -2.23
HMGA1P17096 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.15□□□□□ -2.23
HMGA1P17096 MIR3616-201ENST00000584070 92 ntBASIC1.15□□□□□ -2.23
HMGA1P17096 AC018755.4-201ENST00000619715 454 ntBASIC1.15□□□□□ -2.23
HMGA1P17096 AC073592.7-201ENST00000623659 507 ntBASIC1.15□□□□□ -2.23
HMGA1P17096 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
HMGA1P17096 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
HMGA1P17096 Y_RNA.355-201ENST00000365462 98 ntBASIC1.14□□□□□ -2.23
HMGA1P17096 AL513475.1-201ENST00000406602 315 ntBASIC1.14□□□□□ -2.23
HMGA1P17096 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.14□□□□□ -2.23
HMGA1P17096 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.14□□□□□ -2.23
HMGA1P17096 AL591704.2-201ENST00000421658 181 ntBASIC1.14□□□□□ -2.23
HMGA1P17096 MOB1AP2-201ENST00000446060 614 ntBASIC1.14□□□□□ -2.23
HMGA1P17096 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.14□□□□□ -2.23
HMGA1P17096 AC005297.2-201ENST00000450430 606 ntBASIC1.14□□□□□ -2.23
HMGA1P17096 USP9YP34-201ENST00000453983 808 ntBASIC1.14□□□□□ -2.23
HMGA1P17096 snoU13.4-201ENST00000458916 104 ntBASIC1.14□□□□□ -2.23
HMGA1P17096 AC092902.1-201ENST00000486999 259 ntBASIC1.14□□□□□ -2.23
HMGA1P17096 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.14□□□□□ -2.23
HMGA1P17096 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.14□□□□□ -2.23
HMGA1P17096 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.14□□□□□ -2.23
HMGA1P17096 ARL2BPP4-201ENST00000506854 471 ntBASIC1.14□□□□□ -2.23
HMGA1P17096 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.14□□□□□ -2.23
HMGA1P17096 AF131216.2-201ENST00000512316 564 ntBASIC1.14□□□□□ -2.23
HMGA1P17096 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.14□□□□□ -2.23
HMGA1P17096 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.14□□□□□ -2.23
HMGA1P17096 AC022880.1-201ENST00000534017 973 ntBASIC1.14□□□□□ -2.23
HMGA1P17096 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.14□□□□□ -2.23
HMGA1P17096 HSBP1P1-201ENST00000555205 166 ntBASIC1.14□□□□□ -2.23
HMGA1P17096 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.14□□□□□ -2.23
HMGA1P17096 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.14□□□□□ -2.23
HMGA1P17096 AC023824.2-201ENST00000566185 400 ntBASIC1.14□□□□□ -2.23
HMGA1P17096 OR4G1P-201ENST00000588632 938 ntBASIC1.14□□□□□ -2.23
HMGA1P17096 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.14□□□□□ -2.23
HMGA1P17096 AC097468.3-201ENST00000607956 456 ntBASIC1.14□□□□□ -2.23
HMGA1P17096 AL449363.1-201ENST00000617815 186 ntBASIC1.14□□□□□ -2.23
HMGA1P17096 AC097655.1-201ENST00000635075 318 ntBASIC1.14□□□□□ -2.23
HMGA1P17096 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
HMGA1P17096 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.13□□□□□ -2.23
HMGA1P17096 RNU6-920P-201ENST00000410926 92 ntBASIC1.13□□□□□ -2.23
HMGA1P17096 OR9R1P-201ENST00000412200 877 ntBASIC1.13□□□□□ -2.23
HMGA1P17096 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.13□□□□□ -2.23
HMGA1P17096 OR51A5P-201ENST00000415429 942 ntBASIC1.13□□□□□ -2.23
HMGA1P17096 AL356320.2-201ENST00000417263 507 ntBASIC1.13□□□□□ -2.23
HMGA1P17096 RPS15AP40-201ENST00000419621 391 ntBASIC1.13□□□□□ -2.23
HMGA1P17096 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
HMGA1P17096 MTCO3P46-201ENST00000425787 232 ntBASIC1.13□□□□□ -2.23
HMGA1P17096 AC093716.1-201ENST00000435923 377 ntBASIC1.13□□□□□ -2.23
HMGA1P17096 CALM1P1-201ENST00000442082 433 ntBASIC1.13□□□□□ -2.23
HMGA1P17096 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
HMGA1P17096 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.13□□□□□ -2.23
HMGA1P17096 ANKRD26P4-201ENST00000455755 950 ntBASIC1.13□□□□□ -2.23
HMGA1P17096 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.13□□□□□ -2.23
HMGA1P17096 NAP1L1P3-201ENST00000462291 880 ntBASIC1.13□□□□□ -2.23
HMGA1P17096 AC107398.1-201ENST00000486904 505 ntBASIC1.13□□□□□ -2.23
HMGA1P17096 AC021146.2-201ENST00000504736 556 ntBASIC1.13□□□□□ -2.23
HMGA1P17096 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.13□□□□□ -2.23
HMGA1P17096 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
HMGA1P17096 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.13□□□□□ -2.23
HMGA1P17096 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.13□□□□□ -2.23
HMGA1P17096 AC007229.1-201ENST00000590455 412 ntBASIC1.13□□□□□ -2.23
HMGA1P17096 AL109918.3-201ENST00000603072 338 ntBASIC1.13□□□□□ -2.23
HMGA1P17096 AL355812.1-201ENST00000603215 216 ntBASIC1.13□□□□□ -2.23
HMGA1P17096 AC097504.2-201ENST00000608088 454 ntBASIC1.13□□□□□ -2.23
HMGA1P17096 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC1.13□□□□□ -2.23
HMGA1P17096 AL161423.1-201ENST00000613700 262 ntBASIC1.13□□□□□ -2.23
HMGA1P17096 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.13□□□□□ -2.23
HMGA1P17096 AC092140.2-201ENST00000618027 521 ntBASIC1.13□□□□□ -2.23
HMGA1P17096 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
HMGA1P17096 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
HMGA1P17096 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HMGA1P17096 MIR222-201ENST00000384992 110 ntBASIC1.12□□□□□ -2.23
HMGA1P17096 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.12□□□□□ -2.23
HMGA1P17096 RPS29P28-201ENST00000446439 141 ntBASIC1.12□□□□□ -2.23
HMGA1P17096 TPMTP4-201ENST00000450749 678 ntBASIC1.12□□□□□ -2.23
HMGA1P17096 snoU13.3-201ENST00000459441 104 ntBASIC1.12□□□□□ -2.23
HMGA1P17096 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.12□□□□□ -2.23
HMGA1P17096 RN7SKP179-201ENST00000516126 217 ntBASIC1.12□□□□□ -2.23
HMGA1P17096 SNORA31.20-201ENST00000517111 133 ntBASIC1.12□□□□□ -2.23
HMGA1P17096 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC1.12□□□□□ -2.23
HMGA1P17096 AC007620.3-201ENST00000608131 497 ntBASIC1.12□□□□□ -2.23
HMGA1P17096 AC025594.3-201ENST00000613068 790 ntBASIC1.12□□□□□ -2.23
HMGA1P17096 FAM157B-203ENST00000639350 358 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms