Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RARAP10276 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RARAP10276 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.1□□□□□ -1.59
RARAP10276 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
RARAP10276 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.1□□□□□ -1.59
RARAP10276 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
RARAP10276 SNORD27-201ENST00000363981 72 ntBASIC5.1□□□□□ -1.59
RARAP10276 RNU6-338P-201ENST00000383888 105 ntBASIC5.1□□□□□ -1.59
RARAP10276 Y_RNA.533-201ENST00000384596 114 ntBASIC5.1□□□□□ -1.59
RARAP10276 Y_RNA.534-201ENST00000384599 112 ntBASIC5.1□□□□□ -1.59
RARAP10276 RNU6-146P-201ENST00000384602 108 ntBASIC5.1□□□□□ -1.59
RARAP10276 Y_RNA.539-201ENST00000384635 107 ntBASIC5.1□□□□□ -1.59
RARAP10276 MIR765-201ENST00000390226 114 ntBASIC5.1□□□□□ -1.59
RARAP10276 RNU6-121P-201ENST00000410525 99 ntBASIC5.1□□□□□ -1.59
RARAP10276 RNU4-78P-201ENST00000410940 126 ntBASIC5.1□□□□□ -1.59
RARAP10276 TBCAP2-201ENST00000416175 326 ntBASIC5.1□□□□□ -1.59
RARAP10276 BX510359.3-201ENST00000422168 306 ntBASIC5.1□□□□□ -1.59
RARAP10276 DHX9P1-201ENST00000436565 3076 ntBASIC5.1□□□□□ -1.59
RARAP10276 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.1□□□□□ -1.59
RARAP10276 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RARAP10276 AC108751.2-201ENST00000469993 231 ntBASIC5.1□□□□□ -1.59
RARAP10276 RPL23AP2-201ENST00000471227 466 ntBASIC5.1□□□□□ -1.59
RARAP10276 RPL7P5-201ENST00000471472 736 ntBASIC5.1□□□□□ -1.59
RARAP10276 HMGN2P13-201ENST00000476476 274 ntBASIC5.1□□□□□ -1.59
RARAP10276 RN7SL629P-201ENST00000489622 285 ntBASIC5.1□□□□□ -1.59
RARAP10276 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.1□□□□□ -1.59
RARAP10276 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.1□□□□□ -1.59
RARAP10276 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.1□□□□□ -1.59
RARAP10276 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.1□□□□□ -1.59
RARAP10276 AC008958.1-201ENST00000511047 682 ntBASIC5.1□□□□□ -1.59
RARAP10276 RNU6-911P-201ENST00000516523 104 ntBASIC5.1□□□□□ -1.59
RARAP10276 RN7SKP147-201ENST00000517154 244 ntBASIC5.1□□□□□ -1.59
RARAP10276 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RARAP10276 CPDP1-201ENST00000579660 283 ntBASIC5.1□□□□□ -1.59
RARAP10276 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.1□□□□□ -1.59
RARAP10276 AP001282.2-201ENST00000616149 309 ntBASIC5.1□□□□□ -1.59
RARAP10276 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.1□□□□□ -1.59
RARAP10276 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RARAP10276 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RARAP10276 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RARAP10276 AC008079.2-201ENST00000623543 20396 ntBASIC5.09□□□□□ -1.59
RARAP10276 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RARAP10276 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
RARAP10276 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.09□□□□□ -1.59
RARAP10276 RNU6-249P-201ENST00000363016 102 ntBASIC5.09□□□□□ -1.59
RARAP10276 Y_RNA.183-201ENST00000363882 113 ntBASIC5.09□□□□□ -1.59
RARAP10276 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.09□□□□□ -1.59
RARAP10276 RNU6-933P-201ENST00000384424 107 ntBASIC5.09□□□□□ -1.59
RARAP10276 MIR628-201ENST00000385229 95 ntBASIC5.09□□□□□ -1.59
RARAP10276 AL591034.2-201ENST00000402839 359 ntBASIC5.09□□□□□ -1.59
RARAP10276 AL513475.1-201ENST00000406602 315 ntBASIC5.09□□□□□ -1.59
RARAP10276 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.09□□□□□ -1.59
RARAP10276 MIR1178-201ENST00000408396 91 ntBASIC5.09□□□□□ -1.59
RARAP10276 RNU2-25P-201ENST00000411041 191 ntBASIC5.09□□□□□ -1.59
RARAP10276 RNU2-14P-201ENST00000411053 191 ntBASIC5.09□□□□□ -1.59
RARAP10276 RNU2-71P-201ENST00000411395 189 ntBASIC5.09□□□□□ -1.59
RARAP10276 AL353621.1-201ENST00000418219 243 ntBASIC5.09□□□□□ -1.59
RARAP10276 RPS27AP12-201ENST00000429552 465 ntBASIC5.09□□□□□ -1.59
RARAP10276 HMGB1P27-201ENST00000431429 603 ntBASIC5.09□□□□□ -1.59
RARAP10276 RPEP5-201ENST00000441137 268 ntBASIC5.09□□□□□ -1.59
RARAP10276 NDUFB1P2-201ENST00000449477 176 ntBASIC5.09□□□□□ -1.59
RARAP10276 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.09□□□□□ -1.59
RARAP10276 RN7SL610P-201ENST00000463845 291 ntBASIC5.09□□□□□ -1.59
RARAP10276 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.09□□□□□ -1.59
RARAP10276 RNU6-840P-201ENST00000517275 65 ntBASIC5.09□□□□□ -1.59
RARAP10276 HIGD1AP5-201ENST00000529959 259 ntBASIC5.09□□□□□ -1.59
RARAP10276 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.09□□□□□ -1.59
RARAP10276 MIR4512-201ENST00000583257 77 ntBASIC5.09□□□□□ -1.59
RARAP10276 AL731566.2-201ENST00000618971 317 ntBASIC5.09□□□□□ -1.59
RARAP10276 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.09□□□□□ -1.59
RARAP10276 AL022401.1-201ENST00000619498 108 ntBASIC5.09□□□□□ -1.59
RARAP10276 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RARAP10276 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RARAP10276 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
RARAP10276 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
RARAP10276 AC139769.1-204ENST00000472297 1931 ntBASIC5.09□□□□□ -1.6
RARAP10276 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.08□□□□□ -1.6
RARAP10276 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
RARAP10276 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
RARAP10276 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RARAP10276 RNU1-83P-201ENST00000363426 164 ntBASIC5.08□□□□□ -1.6
RARAP10276 Y_RNA.324-201ENST00000365165 102 ntBASIC5.08□□□□□ -1.6
RARAP10276 U8.8-201ENST00000365399 135 ntBASIC5.08□□□□□ -1.6
RARAP10276 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
RARAP10276 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RARAP10276 RNU6-130P-201ENST00000411112 103 ntBASIC5.08□□□□□ -1.6
RARAP10276 AC063979.1-201ENST00000415539 377 ntBASIC5.08□□□□□ -1.6
RARAP10276 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RARAP10276 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.08□□□□□ -1.6
RARAP10276 AC093162.1-201ENST00000419682 124 ntBASIC5.08□□□□□ -1.6
RARAP10276 AC092423.1-201ENST00000430165 186 ntBASIC5.08□□□□□ -1.6
RARAP10276 AC004383.1-201ENST00000438135 289 ntBASIC5.08□□□□□ -1.6
RARAP10276 RPL23AP56-201ENST00000460778 453 ntBASIC5.08□□□□□ -1.6
RARAP10276 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.08□□□□□ -1.6
RARAP10276 RNU5B-3P-201ENST00000516601 115 ntBASIC5.08□□□□□ -1.6
RARAP10276 Y_RNA.719-201ENST00000517156 106 ntBASIC5.08□□□□□ -1.6
RARAP10276 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.08□□□□□ -1.6
RARAP10276 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.08□□□□□ -1.6
RARAP10276 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
RARAP10276 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms