Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 Y_RNA.201-201ENST00000364052 96 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 SNORA4.1-201ENST00000364263 144 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 SNORA14A-201ENST00000364773 135 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 SNORA1.3-201ENST00000384676 136 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 SNORA26.8-201ENST00000391306 124 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 AL512633.1-201ENST00000399931 655 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 AL356057.3-201ENST00000402607 340 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 RNA5SP38-201ENST00000410750 119 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXC4P09017 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXC4P09017 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.62□□□□□ -1.99
HOXC4P09017 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXC4P09017 MTCO2P7-201ENST00000446518 666 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.62□□□□□ -1.99
HOXC4P09017 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXC4P09017 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.62□□□□□ -1.99
HOXC4P09017 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.62□□□□□ -1.99
HOXC4P09017 RNU6-1261P-201ENST00000517194 104 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXC4P09017 OR5AK1P-201ENST00000524837 922 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 AP001189.2-201ENST00000527320 189 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 HSPE1P20-201ENST00000538133 289 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXC4P09017 AL355836.1-201ENST00000555951 870 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 MED28P6-201ENST00000558776 231 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.62□□□□□ -1.99
HOXC4P09017 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXC4P09017 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXC4P09017 AC025165.5-201ENST00000602802 578 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 AP000787.2-201ENST00000604432 568 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 AC112220.3-201ENST00000605502 502 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 AC103591.3-201ENST00000608684 209 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 AC005332.6-201ENST00000613178 446 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.62□□□□□ -1.99
HOXC4P09017 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.62□□□□□ -1.99
HOXC4P09017 CR381653.2-201ENST00000624041 768 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
HOXC4P09017 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HOXC4P09017 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.62□□□□□ -1.99
HOXC4P09017 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HOXC4P09017 AC107982.1-201ENST00000507171 1300 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HOXC4P09017 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.62□□□□□ -1.99
HOXC4P09017 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
HOXC4P09017 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.61□□□□□ -1.99
HOXC4P09017 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HOXC4P09017 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HOXC4P09017 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.61□□□□□ -1.99
HOXC4P09017 AL672167.1-206ENST00000356293 943 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 Y_RNA.77-201ENST00000362962 107 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 VTRNA1-1-201ENST00000363120 99 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 RNA5SP68-201ENST00000363885 119 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXC4P09017 RNU6-657P-201ENST00000383904 107 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 MT-TH-201ENST00000387441 69 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HOXC4P09017 AC016769.3-201ENST00000396562 315 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 RPL23AP29-201ENST00000397284 453 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 RPS4XP3-201ENST00000398541 413 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 AL136372.1-201ENST00000403060 228 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 RNU2-15P-201ENST00000410692 191 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 RPLP0P7-201ENST00000416050 667 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXC4P09017 SSXP9-201ENST00000417503 292 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXC4P09017 AL137014.1-201ENST00000420490 1226 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 MTCO3P1-205ENST00000422088 832 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.61□□□□□ -1.99
HOXC4P09017 AC244035.1-201ENST00000430042 390 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 AC098826.1-201ENST00000433943 471 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 AC129850.1-201ENST00000436203 508 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 AL590664.1-201ENST00000448065 339 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 KATNBL1P6-201ENST00000453433 915 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 RPS3P1-201ENST00000456781 192 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 RPL30P14-201ENST00000482744 348 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.61□□□□□ -1.99
HOXC4P09017 OR4G11P-201ENST00000492842 939 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.61□□□□□ -1.99
HOXC4P09017 MTCYBP17-201ENST00000503579 789 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 HMGB1P28-201ENST00000507778 552 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 AC093281.2-201ENST00000510153 597 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.61□□□□□ -1.99
HOXC4P09017 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXC4P09017 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXC4P09017 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.61□□□□□ -1.99
HOXC4P09017 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HOXC4P09017 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.61□□□□□ -1.99
HOXC4P09017 OR7K1P-201ENST00000546439 926 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXC4P09017 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXC4P09017 ACTR3BP3-201ENST00000565577 979 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXC4P09017 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.61□□□□□ -1.99
HOXC4P09017 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.61□□□□□ -1.99
HOXC4P09017 AC106900.2-201ENST00000604994 317 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXC4P09017 AL031667.3-201ENST00000620124 655 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms