Protein–RNA interactions for Protein: P08138

NGFR, Tumor necrosis factor receptor superfamily member 16, humanhuman

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFRP08138 RAC1P7-201ENST00000445367 377 ntBASIC3.4□□□□□ -1.87
NGFRP08138 DDX3P2-201ENST00000446138 111 ntBASIC3.4□□□□□ -1.87
NGFRP08138 RPS4XP10-201ENST00000465034 731 ntBASIC3.4□□□□□ -1.87
NGFRP08138 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.4□□□□□ -1.87
NGFRP08138 GMFBP1-201ENST00000467831 427 ntBASIC3.4□□□□□ -1.87
NGFRP08138 AC006512.1-201ENST00000468816 291 ntBASIC3.4□□□□□ -1.87
NGFRP08138 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
NGFRP08138 AC026427.2-201ENST00000506228 536 ntBASIC3.4□□□□□ -1.87
NGFRP08138 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.4□□□□□ -1.87
NGFRP08138 RNU6-1314P-201ENST00000517139 104 ntBASIC3.4□□□□□ -1.87
NGFRP08138 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.4□□□□□ -1.87
NGFRP08138 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.4□□□□□ -1.87
NGFRP08138 AP003072.1-201ENST00000531740 145 ntBASIC3.4□□□□□ -1.87
NGFRP08138 AC087241.2-201ENST00000535801 324 ntBASIC3.4□□□□□ -1.87
NGFRP08138 SETP2-201ENST00000553886 926 ntBASIC3.4□□□□□ -1.87
NGFRP08138 OR4K8P-201ENST00000578842 1048 ntBASIC3.4□□□□□ -1.87
NGFRP08138 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.4□□□□□ -1.87
NGFRP08138 AC243960.4-201ENST00000600532 288 ntBASIC3.4□□□□□ -1.87
NGFRP08138 AC110741.2-201ENST00000605278 268 ntBASIC3.4□□□□□ -1.87
NGFRP08138 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.4□□□□□ -1.87
NGFRP08138 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.4□□□□□ -1.87
NGFRP08138 PART1_1.1-201ENST00000611761 217 ntBASIC3.4□□□□□ -1.87
NGFRP08138 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.4□□□□□ -1.87
NGFRP08138 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.4□□□□□ -1.87
NGFRP08138 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NGFRP08138 ASNSP3-201ENST00000451989 1306 ntBASIC3.4□□□□□ -1.87
NGFRP08138 AC073073.2-201ENST00000609827 2578 ntBASIC3.4□□□□□ -1.87
NGFRP08138 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
NGFRP08138 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NGFRP08138 AL645937.1-201ENST00000641739 1652 ntBASIC3.39□□□□□ -1.87
NGFRP08138 AC090337.1-201ENST00000579651 2074 ntBASIC3.39□□□□□ -1.87
NGFRP08138 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NGFRP08138 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.39□□□□□ -1.87
NGFRP08138 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
NGFRP08138 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NGFRP08138 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NGFRP08138 SNORA63-201ENST00000363450 132 ntBASIC3.39□□□□□ -1.87
NGFRP08138 Y_RNA.138-201ENST00000363462 102 ntBASIC3.39□□□□□ -1.87
NGFRP08138 RNA5SP479-201ENST00000364858 117 ntBASIC3.39□□□□□ -1.87
NGFRP08138 RNU4-48P-201ENST00000365559 182 ntBASIC3.39□□□□□ -1.87
NGFRP08138 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.39□□□□□ -1.87
NGFRP08138 SNORA32.2-201ENST00000384049 122 ntBASIC3.39□□□□□ -1.87
NGFRP08138 Y_RNA.474-201ENST00000384341 102 ntBASIC3.39□□□□□ -1.87
NGFRP08138 MIR514A2-201ENST00000385131 88 ntBASIC3.39□□□□□ -1.87
NGFRP08138 MIR514A3-201ENST00000385132 88 ntBASIC3.39□□□□□ -1.87
NGFRP08138 MIR1183-201ENST00000408856 89 ntBASIC3.39□□□□□ -1.87
NGFRP08138 RN7SKP159-201ENST00000410657 292 ntBASIC3.39□□□□□ -1.87
NGFRP08138 RNU2-15P-201ENST00000410692 191 ntBASIC3.39□□□□□ -1.87
NGFRP08138 Y_RNA.615-201ENST00000410769 117 ntBASIC3.39□□□□□ -1.87
NGFRP08138 MTND3P8-201ENST00000412909 339 ntBASIC3.39□□□□□ -1.87
NGFRP08138 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.39□□□□□ -1.87
NGFRP08138 AF228730.4-201ENST00000421457 183 ntBASIC3.39□□□□□ -1.87
NGFRP08138 DUTP6-201ENST00000425573 462 ntBASIC3.39□□□□□ -1.87
NGFRP08138 AC005534.2-201ENST00000431047 433 ntBASIC3.39□□□□□ -1.87
NGFRP08138 CKS1BP5-201ENST00000434172 273 ntBASIC3.39□□□□□ -1.87
NGFRP08138 MTATP6P16-201ENST00000434543 526 ntBASIC3.39□□□□□ -1.87
NGFRP08138 AC024082.2-201ENST00000434771 238 ntBASIC3.39□□□□□ -1.87
NGFRP08138 IFNA20P-201ENST00000436840 528 ntBASIC3.39□□□□□ -1.87
NGFRP08138 UBE2V1P13-201ENST00000436983 439 ntBASIC3.39□□□□□ -1.87
NGFRP08138 AC093156.1-201ENST00000440382 670 ntBASIC3.39□□□□□ -1.87
NGFRP08138 SNORD121B-201ENST00000458838 81 ntBASIC3.39□□□□□ -1.87
NGFRP08138 AC007537.2-201ENST00000472093 511 ntBASIC3.39□□□□□ -1.87
NGFRP08138 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.39□□□□□ -1.87
NGFRP08138 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.39□□□□□ -1.87
NGFRP08138 AC008489.1-201ENST00000524271 483 ntBASIC3.39□□□□□ -1.87
NGFRP08138 AP005435.4-201ENST00000529514 284 ntBASIC3.39□□□□□ -1.87
NGFRP08138 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.39□□□□□ -1.87
NGFRP08138 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.39□□□□□ -1.87
NGFRP08138 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.39□□□□□ -1.87
NGFRP08138 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.39□□□□□ -1.87
NGFRP08138 MTCO3P13-201ENST00000577757 781 ntBASIC3.39□□□□□ -1.87
NGFRP08138 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.39□□□□□ -1.87
NGFRP08138 MIR4742-201ENST00000581069 85 ntBASIC3.39□□□□□ -1.87
NGFRP08138 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.39□□□□□ -1.87
NGFRP08138 AL133255.1-201ENST00000606374 441 ntBASIC3.39□□□□□ -1.87
NGFRP08138 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.39□□□□□ -1.87
NGFRP08138 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.39□□□□□ -1.87
NGFRP08138 uc_338.5-201ENST00000611839 155 ntBASIC3.39□□□□□ -1.87
NGFRP08138 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.39□□□□□ -1.87
NGFRP08138 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.39□□□□□ -1.87
NGFRP08138 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
NGFRP08138 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NGFRP08138 CEP170P1-201ENST00000502249 4587 ntBASIC3.39□□□□□ -1.87
NGFRP08138 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
NGFRP08138 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NGFRP08138 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.38□□□□□ -1.87
NGFRP08138 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NGFRP08138 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
NGFRP08138 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NGFRP08138 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NGFRP08138 USP8P1-201ENST00000494673 3183 ntBASIC3.38□□□□□ -1.87
NGFRP08138 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
NGFRP08138 MIR558-201ENST00000384920 94 ntBASIC3.38□□□□□ -1.87
NGFRP08138 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NGFRP08138 RPL31P2-201ENST00000413849 377 ntBASIC3.38□□□□□ -1.87
NGFRP08138 NDUFB4P5-201ENST00000415445 361 ntBASIC3.38□□□□□ -1.87
NGFRP08138 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.38□□□□□ -1.87
NGFRP08138 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.38□□□□□ -1.87
NGFRP08138 AC018630.2-202ENST00000422992 927 ntBASIC3.38□□□□□ -1.87
NGFRP08138 AC018644.1-201ENST00000429934 551 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms