Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL022578.1-201ENST00000439330 1433 ntBASIC1.88□□□□□ -2.11
HLA-DQB2P05538 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HLA-DQB2P05538 AC022336.2-201ENST00000568966 2538 ntBASIC1.88□□□□□ -2.11
HLA-DQB2P05538 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
HLA-DQB2P05538 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HLA-DQB2P05538 SNORA6-201ENST00000384033 151 ntBASIC1.87□□□□□ -2.11
HLA-DQB2P05538 RNU6-76P-201ENST00000384060 104 ntBASIC1.87□□□□□ -2.11
HLA-DQB2P05538 RNU6-549P-201ENST00000384433 107 ntBASIC1.87□□□□□ -2.11
HLA-DQB2P05538 MIR9-3-201ENST00000385084 90 ntBASIC1.87□□□□□ -2.11
HLA-DQB2P05538 AC019129.1-201ENST00000403786 261 ntBASIC1.87□□□□□ -2.11
HLA-DQB2P05538 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DQB2P05538 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.87□□□□□ -2.11
HLA-DQB2P05538 MTCO3P1-205ENST00000422088 832 ntBASIC1.87□□□□□ -2.11
HLA-DQB2P05538 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.87□□□□□ -2.11
HLA-DQB2P05538 SRIP2-201ENST00000428470 166 ntBASIC1.87□□□□□ -2.11
HLA-DQB2P05538 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DQB2P05538 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.87□□□□□ -2.11
HLA-DQB2P05538 SUMO2P2-201ENST00000456482 255 ntBASIC1.87□□□□□ -2.11
HLA-DQB2P05538 AC072039.1-201ENST00000477611 581 ntBASIC1.87□□□□□ -2.11
HLA-DQB2P05538 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.87□□□□□ -2.11
HLA-DQB2P05538 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.87□□□□□ -2.11
HLA-DQB2P05538 NDUFS5P6-201ENST00000529136 295 ntBASIC1.87□□□□□ -2.11
HLA-DQB2P05538 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DQB2P05538 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.87□□□□□ -2.11
HLA-DQB2P05538 MTCYBP27-201ENST00000555160 670 ntBASIC1.87□□□□□ -2.11
HLA-DQB2P05538 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DQB2P05538 AC009127.3-201ENST00000570531 403 ntBASIC1.87□□□□□ -2.11
HLA-DQB2P05538 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DQB2P05538 AC005498.1-201ENST00000592125 465 ntBASIC1.87□□□□□ -2.11
HLA-DQB2P05538 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.87□□□□□ -2.11
HLA-DQB2P05538 RPP40P2-201ENST00000603596 712 ntBASIC1.87□□□□□ -2.11
HLA-DQB2P05538 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HLA-DQB2P05538 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
HLA-DQB2P05538 AC007785.2-201ENST00000598627 1916 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 HMGB1P5-201ENST00000255320 642 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 RNU5A-1-201ENST00000362698 116 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 SNORA16.1-201ENST00000364597 132 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 AL356131.1-201ENST00000405826 414 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 SUMO2P12-201ENST00000405924 140 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 RNA5SP489-201ENST00000410986 109 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.86□□□□□ -2.11
HLA-DQB2P05538 AL357078.2-201ENST00000416486 427 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 AL121882.1-201ENST00000422893 417 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 HMGN2P38-201ENST00000423806 265 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.86□□□□□ -2.11
HLA-DQB2P05538 AC007742.1-201ENST00000425789 329 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 AL590383.1-201ENST00000428602 75 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 AL356867.1-201ENST00000429623 299 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 ELOCP26-201ENST00000436067 329 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.86□□□□□ -2.11
HLA-DQB2P05538 MTCO3P43-201ENST00000440974 771 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 VN1R10P-201ENST00000447106 875 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.86□□□□□ -2.11
HLA-DQB2P05538 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.86□□□□□ -2.11
HLA-DQB2P05538 AC078857.1-201ENST00000469870 667 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 TRBV1-201ENST00000476502 284 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 AC108734.3-201ENST00000481241 1165 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 AC008427.1-201ENST00000503102 655 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 SUMO2P6-201ENST00000505273 288 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.86□□□□□ -2.11
HLA-DQB2P05538 SCARNA15.2-201ENST00000516409 127 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 RNA5SP364-201ENST00000516938 78 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 OR11H5P-201ENST00000554039 926 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.86□□□□□ -2.11
HLA-DQB2P05538 AL049838.1-201ENST00000563647 981 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 BNIP3P24-201ENST00000593398 557 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.86□□□□□ -2.11
HLA-DQB2P05538 AL356280.1-201ENST00000603614 379 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.86□□□□□ -2.11
HLA-DQB2P05538 VN1R74P-201ENST00000613259 503 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
HLA-DQB2P05538 AL445493.3-201ENST00000619568 477 ntBASIC1.86□□□□□ -2.11
HLA-DQB2P05538 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.86□□□□□ -2.11
HLA-DQB2P05538 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.86□□□□□ -2.11
HLA-DQB2P05538 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.85□□□□□ -2.11
HLA-DQB2P05538 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
HLA-DQB2P05538 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HLA-DQB2P05538 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HLA-DQB2P05538 MIR16-2-201ENST00000362117 81 ntBASIC1.85□□□□□ -2.11
HLA-DQB2P05538 MIR514A1-201ENST00000385133 98 ntBASIC1.85□□□□□ -2.11
HLA-DQB2P05538 AP002784.2-201ENST00000397300 549 ntBASIC1.85□□□□□ -2.11
HLA-DQB2P05538 U3.40-201ENST00000408706 208 ntBASIC1.85□□□□□ -2.11
HLA-DQB2P05538 AL592310.1-201ENST00000414330 671 ntBASIC1.85□□□□□ -2.11
HLA-DQB2P05538 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DQB2P05538 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DQB2P05538 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DQB2P05538 DDX3P2-201ENST00000446138 111 ntBASIC1.85□□□□□ -2.11
HLA-DQB2P05538 COX6CP18-201ENST00000448769 222 ntBASIC1.85□□□□□ -2.11
HLA-DQB2P05538 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
HLA-DQB2P05538 LARP1BP2-201ENST00000486594 519 ntBASIC1.85□□□□□ -2.11
HLA-DQB2P05538 BOLA3P3-201ENST00000505182 232 ntBASIC1.85□□□□□ -2.11
HLA-DQB2P05538 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.85□□□□□ -2.11
HLA-DQB2P05538 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.85□□□□□ -2.11
HLA-DQB2P05538 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.85□□□□□ -2.11
HLA-DQB2P05538 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.85□□□□□ -2.11
HLA-DQB2P05538 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DQB2P05538 ZNF971P-201ENST00000562068 1249 ntBASIC1.85□□□□□ -2.11
HLA-DQB2P05538 MIR4789-201ENST00000577469 82 ntBASIC1.85□□□□□ -2.11
HLA-DQB2P05538 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms