Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 TPTE2P4-201ENST00000258589 1605 ntBASIC2.22□□□□□ -2.05
HLA-DPB1P04440 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
HLA-DPB1P04440 RNU6-157P-201ENST00000383957 107 ntBASIC2.22□□□□□ -2.05
HLA-DPB1P04440 RNU6-1027P-201ENST00000383998 107 ntBASIC2.22□□□□□ -2.05
HLA-DPB1P04440 MIR1289-1-201ENST00000408836 144 ntBASIC2.22□□□□□ -2.05
HLA-DPB1P04440 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.22□□□□□ -2.05
HLA-DPB1P04440 TPMTP3-201ENST00000411928 735 ntBASIC2.22□□□□□ -2.05
HLA-DPB1P04440 AF274854.1-201ENST00000413236 615 ntBASIC2.22□□□□□ -2.05
HLA-DPB1P04440 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.22□□□□□ -2.05
HLA-DPB1P04440 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.22□□□□□ -2.05
HLA-DPB1P04440 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.22□□□□□ -2.05
HLA-DPB1P04440 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.22□□□□□ -2.05
HLA-DPB1P04440 AL513328.1-201ENST00000446460 224 ntBASIC2.22□□□□□ -2.05
HLA-DPB1P04440 TPT1P14-201ENST00000448018 505 ntBASIC2.22□□□□□ -2.05
HLA-DPB1P04440 AC108938.1-201ENST00000451204 136 ntBASIC2.22□□□□□ -2.05
HLA-DPB1P04440 MTND2P24-201ENST00000453434 806 ntBASIC2.22□□□□□ -2.05
HLA-DPB1P04440 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.22□□□□□ -2.05
HLA-DPB1P04440 AC073901.1-201ENST00000462471 408 ntBASIC2.22□□□□□ -2.05
HLA-DPB1P04440 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.22□□□□□ -2.05
HLA-DPB1P04440 AC135721.1-201ENST00000497954 479 ntBASIC2.22□□□□□ -2.05
HLA-DPB1P04440 AC022447.3-201ENST00000506865 495 ntBASIC2.22□□□□□ -2.05
HLA-DPB1P04440 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HLA-DPB1P04440 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.22□□□□□ -2.05
HLA-DPB1P04440 AC023538.1-201ENST00000534576 736 ntBASIC2.22□□□□□ -2.05
HLA-DPB1P04440 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.22□□□□□ -2.05
HLA-DPB1P04440 DUXAP1-201ENST00000556632 463 ntBASIC2.22□□□□□ -2.05
HLA-DPB1P04440 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.22□□□□□ -2.05
HLA-DPB1P04440 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.22□□□□□ -2.05
HLA-DPB1P04440 AC090888.1-201ENST00000561335 1141 ntBASIC2.22□□□□□ -2.05
HLA-DPB1P04440 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.22□□□□□ -2.05
HLA-DPB1P04440 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.22□□□□□ -2.05
HLA-DPB1P04440 BNIP3P40-201ENST00000596017 556 ntBASIC2.22□□□□□ -2.05
HLA-DPB1P04440 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
HLA-DPB1P04440 AC019226.1-201ENST00000625666 515 ntBASIC2.22□□□□□ -2.05
HLA-DPB1P04440 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.22□□□□□ -2.05
HLA-DPB1P04440 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.22□□□□□ -2.05
HLA-DPB1P04440 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HLA-DPB1P04440 AL138713.1-201ENST00000624026 2130 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 ZNF876P-202ENST00000398732 1485 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 AC007785.2-201ENST00000598627 1916 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 AC010680.1-201ENST00000590024 3590 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 RNU6-462P-201ENST00000362659 105 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 RNA5SP456-201ENST00000364002 114 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 RNU6-198P-201ENST00000384258 104 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 SNORA41-201ENST00000384675 132 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 SNORA80E-201ENST00000384744 137 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 MIR196B-201ENST00000384852 84 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 MIR34A-201ENST00000385130 110 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 U3.37-201ENST00000408528 213 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 MIR320C1-201ENST00000408566 88 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 RNU6-516P-201ENST00000411381 104 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 Z85995.1-201ENST00000415547 335 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 SPA17P1-201ENST00000416656 452 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 RPL7P37-201ENST00000425095 738 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 AC063976.3-201ENST00000426849 329 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 RPL7L1P10-201ENST00000427790 463 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 AL356867.1-201ENST00000429623 299 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 MTND1P32-201ENST00000433043 938 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 CR769776.1-201ENST00000441254 787 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 SDAD1P2-201ENST00000441308 2028 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 PAXBP1P1-201ENST00000449315 447 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 RPS29P12-201ENST00000460178 152 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 AP003467.2-201ENST00000520175 319 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 UBTFL10-201ENST00000528532 562 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 AP002748.2-201ENST00000528671 348 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 AGGF1P5-201ENST00000567900 919 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 AF131215.7-201ENST00000602443 707 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 DUXAP4-201ENST00000603046 613 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 RPL23AP88-201ENST00000605759 454 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 AC027449.1-201ENST00000608890 407 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 AC022960.3-201ENST00000619794 441 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 AL356596.1-201ENST00000624230 379 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 AL159972.1-201ENST00000625150 448 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.21□□□□□ -2.06
HLA-DPB1P04440 AL049641.1-201ENST00000441055 1948 ntBASIC2.21□□□□□ -2.06
HLA-DPB1P04440 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms