Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AL356421.1-201ENST00000403255 413 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 MTATP6P20-201ENST00000414147 562 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.1□□□□□ -2.07
MT-ND4P03905 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.1□□□□□ -2.07
MT-ND4P03905 CYCSP32-201ENST00000440548 321 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 EEF1A1P39-201ENST00000440791 250 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 BNIP3P2-201ENST00000441221 577 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 OR10R1P-201ENST00000441524 1141 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.1□□□□□ -2.07
MT-ND4P03905 MTCYBP3-201ENST00000445588 1137 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.1□□□□□ -2.07
MT-ND4P03905 ATG12P2-201ENST00000456830 416 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.1□□□□□ -2.07
MT-ND4P03905 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.1□□□□□ -2.07
MT-ND4P03905 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.1□□□□□ -2.07
MT-ND4P03905 AC022447.3-201ENST00000506865 495 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 MRPS36P2-201ENST00000512569 299 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.1□□□□□ -2.07
MT-ND4P03905 AC023813.2-201ENST00000564321 469 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.1□□□□□ -2.07
MT-ND4P03905 AC004987.4-201ENST00000603383 338 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 AC007619.2-201ENST00000605743 379 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 AC135507.2-201ENST00000612443 309 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 AC079395.3-201ENST00000615161 484 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 AC109809.1-201ENST00000619665 545 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.1□□□□□ -2.07
MT-ND4P03905 MIR203B-201ENST00000636080 86 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
MT-ND4P03905 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
MT-ND4P03905 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
MT-ND4P03905 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
MT-ND4P03905 AC131280.1-202ENST00000624067 4211 ntBASIC2.09□□□□□ -2.07
MT-ND4P03905 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
MT-ND4P03905 SNORA23-201ENST00000365128 182 ntBASIC2.09□□□□□ -2.07
MT-ND4P03905 TPMTP3-201ENST00000411928 735 ntBASIC2.09□□□□□ -2.07
MT-ND4P03905 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.09□□□□□ -2.07
MT-ND4P03905 AC092047.1-201ENST00000424997 240 ntBASIC2.09□□□□□ -2.07
MT-ND4P03905 AL358075.3-201ENST00000426289 226 ntBASIC2.09□□□□□ -2.07
MT-ND4P03905 MTCO3P30-201ENST00000426425 670 ntBASIC2.09□□□□□ -2.07
MT-ND4P03905 AC006946.1-201ENST00000429106 328 ntBASIC2.09□□□□□ -2.07
MT-ND4P03905 WARS2P1-201ENST00000429678 537 ntBASIC2.09□□□□□ -2.07
MT-ND4P03905 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.09□□□□□ -2.07
MT-ND4P03905 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.09□□□□□ -2.07
MT-ND4P03905 COX7BP2-201ENST00000437976 242 ntBASIC2.09□□□□□ -2.07
MT-ND4P03905 COX6CP12-201ENST00000446748 202 ntBASIC2.09□□□□□ -2.07
MT-ND4P03905 RPS15AP27-201ENST00000449183 343 ntBASIC2.09□□□□□ -2.07
MT-ND4P03905 RPL21P134-201ENST00000453468 483 ntBASIC2.09□□□□□ -2.07
MT-ND4P03905 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.09□□□□□ -2.07
MT-ND4P03905 RNU7-23P-201ENST00000459465 62 ntBASIC2.09□□□□□ -2.07
MT-ND4P03905 AC005410.1-202ENST00000460347 485 ntBASIC2.09□□□□□ -2.07
MT-ND4P03905 MTND4LP3-201ENST00000468320 276 ntBASIC2.09□□□□□ -2.07
MT-ND4P03905 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.09□□□□□ -2.07
MT-ND4P03905 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.09□□□□□ -2.07
MT-ND4P03905 AC116353.3-201ENST00000511215 249 ntBASIC2.09□□□□□ -2.07
MT-ND4P03905 AC109445.1-201ENST00000512356 383 ntBASIC2.09□□□□□ -2.07
MT-ND4P03905 RNU6-840P-201ENST00000517275 65 ntBASIC2.09□□□□□ -2.07
MT-ND4P03905 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.09□□□□□ -2.07
MT-ND4P03905 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.09□□□□□ -2.07
MT-ND4P03905 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.09□□□□□ -2.07
MT-ND4P03905 GTF3AP2-201ENST00000557014 266 ntBASIC2.09□□□□□ -2.07
MT-ND4P03905 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.09□□□□□ -2.07
MT-ND4P03905 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.09□□□□□ -2.07
MT-ND4P03905 AC061975.8-201ENST00000587058 721 ntBASIC2.09□□□□□ -2.07
MT-ND4P03905 AP001269.3-201ENST00000588718 329 ntBASIC2.09□□□□□ -2.07
MT-ND4P03905 AC245884.12-201ENST00000615364 59 ntBASIC2.09□□□□□ -2.07
MT-ND4P03905 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.09□□□□□ -2.07
MT-ND4P03905 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
MT-ND4P03905 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.08□□□□□ -2.08
MT-ND4P03905 AL138713.1-201ENST00000624026 2130 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
MT-ND4P03905 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
MT-ND4P03905 MIRLET7G-201ENST00000362280 84 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 RNU6-744P-201ENST00000365557 107 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 RNU6-1316P-201ENST00000384242 108 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 SNORA41-201ENST00000384675 132 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 MIR27B-201ENST00000385129 97 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.08□□□□□ -2.08
MT-ND4P03905 AL109755.1-201ENST00000401791 649 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 RNU2-52P-201ENST00000410680 190 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 RNU4-72P-201ENST00000410754 173 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.08□□□□□ -2.08
MT-ND4P03905 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.08□□□□□ -2.08
MT-ND4P03905 MTCYBP38-201ENST00000417160 1123 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.08□□□□□ -2.08
MT-ND4P03905 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.08□□□□□ -2.08
MT-ND4P03905 RPS25P9-201ENST00000435591 252 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 Z82210.1-201ENST00000440037 231 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 AL049734.2-201ENST00000441066 616 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.08□□□□□ -2.08
MT-ND4P03905 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.08□□□□□ -2.08
MT-ND4P03905 DPPA3P1-201ENST00000448050 469 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 EXOSC3P1-201ENST00000448649 500 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.08□□□□□ -2.08
MT-ND4P03905 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.08□□□□□ -2.08
MT-ND4P03905 AL139109.1-201ENST00000455491 297 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 RPS20P20-201ENST00000460498 340 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 AC104563.1-201ENST00000476147 376 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 AC108729.1-201ENST00000487812 947 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms