Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
MT-ND1P03886 AL357075.1-201ENST00000404107 726 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 RPL7P25-201ENST00000404151 721 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 MIR1289-1-201ENST00000408836 144 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.83□□□□□ -1.96
MT-ND1P03886 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.83□□□□□ -1.96
MT-ND1P03886 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.83□□□□□ -1.96
MT-ND1P03886 RPL7L1P10-201ENST00000427790 463 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.83□□□□□ -1.96
MT-ND1P03886 AC097713.2-201ENST00000430199 356 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.83□□□□□ -1.96
MT-ND1P03886 AL353706.1-201ENST00000436728 494 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 AL022238.1-201ENST00000442557 355 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.83□□□□□ -1.96
MT-ND1P03886 MTND2P24-201ENST00000453434 806 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 MTCO2P18-201ENST00000457151 658 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 RNA5SP269-201ENST00000459032 137 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 FAM133DP-201ENST00000464802 691 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 AC055855.1-201ENST00000489563 579 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.83□□□□□ -1.96
MT-ND1P03886 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.83□□□□□ -1.96
MT-ND1P03886 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.83□□□□□ -1.96
MT-ND1P03886 SCARNA15.2-201ENST00000516409 127 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 RN7SKP282-201ENST00000516824 299 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.83□□□□□ -1.96
MT-ND1P03886 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.83□□□□□ -1.96
MT-ND1P03886 AP003122.4-201ENST00000530980 758 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.83□□□□□ -1.96
MT-ND1P03886 AC123904.2-201ENST00000548059 300 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.83□□□□□ -1.96
MT-ND1P03886 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.83□□□□□ -1.96
MT-ND1P03886 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.83□□□□□ -1.96
MT-ND1P03886 TPMTP1-201ENST00000592307 737 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 AL109618.2-201ENST00000605527 211 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.83□□□□□ -1.96
MT-ND1P03886 AL161629.2-201ENST00000615347 275 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 AC090132.2-201ENST00000615881 347 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 AC138932.5-201ENST00000617759 563 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.83□□□□□ -1.96
MT-ND1P03886 AC009509.4-201ENST00000619202 509 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 AC009878.1-201ENST00000621819 340 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.83□□□□□ -1.96
MT-ND1P03886 MIR6733-201ENST00000635723 61 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 AC090582.1-201ENST00000636321 199 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 AC099654.13-201ENST00000639774 207 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
MT-ND1P03886 API5P2-201ENST00000397055 1498 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
MT-ND1P03886 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
MT-ND1P03886 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
MT-ND1P03886 AC010680.1-201ENST00000590024 3590 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
MT-ND1P03886 FGF7P2-201ENST00000332473 296 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 Y_RNA.436-201ENST00000384097 102 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 RNU6-297P-201ENST00000384636 107 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 MIR181A2-201ENST00000384863 110 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 MIR514A1-201ENST00000385133 98 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 SNORD115.1-201ENST00000391109 76 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 Y_RNA.608-201ENST00000410647 95 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.82□□□□□ -1.96
MT-ND1P03886 AL451074.5-201ENST00000415894 435 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
MT-ND1P03886 AC006366.1-201ENST00000422002 759 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.82□□□□□ -1.96
MT-ND1P03886 RPL23AP58-201ENST00000440453 469 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.82□□□□□ -1.96
MT-ND1P03886 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.82□□□□□ -1.96
MT-ND1P03886 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.82□□□□□ -1.96
MT-ND1P03886 USP9YP12-201ENST00000450481 570 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 MTND1P9-201ENST00000453775 944 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 AP1S2P1-201ENST00000457344 379 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 AC109925.1-201ENST00000478069 331 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 AL049874.1-201ENST00000489560 388 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 RNA5SP76-201ENST00000516277 87 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.82□□□□□ -1.96
MT-ND1P03886 AL133271.1-201ENST00000538229 291 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.82□□□□□ -1.96
MT-ND1P03886 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.82□□□□□ -1.96
MT-ND1P03886 AC124947.2-202ENST00000552735 133 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.82□□□□□ -1.96
MT-ND1P03886 HMGB1P6-201ENST00000569046 646 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.82□□□□□ -1.96
MT-ND1P03886 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.82□□□□□ -1.96
MT-ND1P03886 AC112191.3-201ENST00000604371 277 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 AC108747.1-201ENST00000609508 535 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 AC138749.5-201ENST00000611461 208 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 AL020991.1-201ENST00000612314 373 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.82□□□□□ -1.96
MT-ND1P03886 AC116165.2-201ENST00000616705 206 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 AC092140.2-201ENST00000618027 521 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.82□□□□□ -1.96
MT-ND1P03886 AC112204.3-201ENST00000623822 332 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 OR5H6-203ENST00000642105 978 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
MT-ND1P03886 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
MT-ND1P03886 MTCO1P12-201ENST00000414273 1543 ntBASIC2.82□□□□□ -1.96
MT-ND1P03886 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
MT-ND1P03886 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
MT-ND1P03886 Y_RNA.201-201ENST00000364052 96 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 RNU6-1078P-201ENST00000364522 103 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms