Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.69□□□□□ -2.14
COL4A1P02462 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
COL4A1P02462 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
COL4A1P02462 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
COL4A1P02462 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
COL4A1P02462 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
COL4A1P02462 RNU6-600P-201ENST00000362524 99 ntBASIC1.68□□□□□ -2.14
COL4A1P02462 RNA5SP393-201ENST00000363423 117 ntBASIC1.68□□□□□ -2.14
COL4A1P02462 RNU6-799P-201ENST00000363567 107 ntBASIC1.68□□□□□ -2.14
COL4A1P02462 RNY1-201ENST00000364228 113 ntBASIC1.68□□□□□ -2.14
COL4A1P02462 RNU6-1027P-201ENST00000383998 107 ntBASIC1.68□□□□□ -2.14
COL4A1P02462 RNU6-1151P-201ENST00000384684 107 ntBASIC1.68□□□□□ -2.14
COL4A1P02462 SNORD65C-201ENST00000390962 71 ntBASIC1.68□□□□□ -2.14
COL4A1P02462 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.68□□□□□ -2.14
COL4A1P02462 AL358075.3-201ENST00000426289 226 ntBASIC1.68□□□□□ -2.14
COL4A1P02462 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.68□□□□□ -2.14
COL4A1P02462 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.68□□□□□ -2.14
COL4A1P02462 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.68□□□□□ -2.14
COL4A1P02462 COX6CP12-201ENST00000446748 202 ntBASIC1.68□□□□□ -2.14
COL4A1P02462 AC023424.2-201ENST00000493479 777 ntBASIC1.68□□□□□ -2.14
COL4A1P02462 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.68□□□□□ -2.14
COL4A1P02462 PRELID3BP4-201ENST00000515476 571 ntBASIC1.68□□□□□ -2.14
COL4A1P02462 RNU6-416P-201ENST00000516265 103 ntBASIC1.68□□□□□ -2.14
COL4A1P02462 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
COL4A1P02462 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.68□□□□□ -2.14
COL4A1P02462 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC1.68□□□□□ -2.14
COL4A1P02462 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.68□□□□□ -2.14
COL4A1P02462 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.68□□□□□ -2.14
COL4A1P02462 VN1R88P-201ENST00000596787 292 ntBASIC1.68□□□□□ -2.14
COL4A1P02462 AL360085.1-201ENST00000604713 532 ntBASIC1.68□□□□□ -2.14
COL4A1P02462 U73479.1-201ENST00000618062 168 ntBASIC1.68□□□□□ -2.14
COL4A1P02462 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
COL4A1P02462 AL359740.1-201ENST00000624340 592 ntBASIC1.68□□□□□ -2.14
COL4A1P02462 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.68□□□□□ -2.14
COL4A1P02462 AC132825.7-201ENST00000638744 335 ntBASIC1.68□□□□□ -2.14
COL4A1P02462 MTND5P3-201ENST00000438536 1800 ntBASIC1.68□□□□□ -2.14
COL4A1P02462 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
COL4A1P02462 RNU6-251P-201ENST00000363235 104 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 SNORA51.12-201ENST00000384448 134 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.67□□□□□ -2.14
COL4A1P02462 UBE2V1P9-201ENST00000414760 368 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.67□□□□□ -2.14
COL4A1P02462 BX664727.1-201ENST00000416024 466 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.67□□□□□ -2.14
COL4A1P02462 OR51AB1P-201ENST00000429046 620 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
COL4A1P02462 HMGN3P1-201ENST00000453847 193 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.67□□□□□ -2.14
COL4A1P02462 AC135721.1-201ENST00000497954 479 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.67□□□□□ -2.14
COL4A1P02462 AC104057.1-201ENST00000515547 497 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 RNA5SP468-201ENST00000516782 93 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.67□□□□□ -2.14
COL4A1P02462 AC139103.1-201ENST00000534696 1030 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 AP003717.3-201ENST00000544832 1180 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 AC084364.2-201ENST00000546924 395 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 AC023813.2-201ENST00000564321 469 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.67□□□□□ -2.14
COL4A1P02462 SNORD84-203ENST00000584275 78 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 AC092474.3-201ENST00000603022 568 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 uc_338.12-201ENST00000616344 181 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 MIR6734-201ENST00000621166 68 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.67□□□□□ -2.14
COL4A1P02462 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
COL4A1P02462 MTND5P31-201ENST00000419366 1374 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.67□□□□□ -2.14
COL4A1P02462 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.67□□□□□ -2.14
COL4A1P02462 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
COL4A1P02462 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
COL4A1P02462 RNU1-22P-201ENST00000363334 158 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 RNU6-1243P-201ENST00000364028 107 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 RNU6-932P-201ENST00000391108 106 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 RNU2-72P-201ENST00000411175 163 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 AC092447.6-201ENST00000414578 210 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.67□□□□□ -2.14
COL4A1P02462 GXYLT1P1-201ENST00000446657 490 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 AL096803.2-201ENST00000450032 677 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 AC008379.1-201ENST00000463655 464 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 AC078857.1-201ENST00000469870 667 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.67□□□□□ -2.14
COL4A1P02462 AC087808.1-201ENST00000520501 361 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.67□□□□□ -2.14
COL4A1P02462 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.67□□□□□ -2.14
COL4A1P02462 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.67□□□□□ -2.14
COL4A1P02462 AL136520.1-202ENST00000555494 763 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.67□□□□□ -2.14
COL4A1P02462 AP005229.2-201ENST00000609980 697 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 AC006329.2-201ENST00000611491 394 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 AC018926.3-201ENST00000618841 406 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 AC007275.1-201ENST00000621243 671 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 OR4G1P-203ENST00000641984 1631 ntBASIC1.67□□□□□ -2.14
COL4A1P02462 AC016716.1-201ENST00000265882 708 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 Y_RNA.110-201ENST00000363220 99 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 RNU6-1-201ENST00000383898 107 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 RNU6-1293P-201ENST00000384077 107 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 RNU6-42P-201ENST00000384165 107 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 RNU6-36P-201ENST00000384172 107 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 RNU6-4P-201ENST00000384205 107 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 RNU6-5P-201ENST00000384238 107 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 RNU6-3P-201ENST00000384314 107 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms