Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MIR1305-201ENST00000408300 86 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 AL451054.2-201ENST00000420896 202 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.03□□□□□ -2.08
HLA-DQA1P01909 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.03□□□□□ -2.08
HLA-DQA1P01909 RPL7P37-201ENST00000425095 738 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 AL365496.1-201ENST00000426885 215 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 AC009414.1-201ENST00000427200 443 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 AL512649.1-201ENST00000428997 581 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 AL035407.1-201ENST00000429211 571 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 RPL35AP22-201ENST00000436855 335 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 ARPC3P1-201ENST00000437218 533 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 BMI1P1-201ENST00000445879 941 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 Z73417.1-201ENST00000447373 778 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.03□□□□□ -2.08
HLA-DQA1P01909 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.03□□□□□ -2.08
HLA-DQA1P01909 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.03□□□□□ -2.08
HLA-DQA1P01909 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.03□□□□□ -2.08
HLA-DQA1P01909 AC009901.1-201ENST00000506703 541 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.03□□□□□ -2.08
HLA-DQA1P01909 SNORA31.21-201ENST00000517180 77 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.03□□□□□ -2.08
HLA-DQA1P01909 AP004247.1-201ENST00000531556 1289 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 OR5BN1P-201ENST00000532955 829 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.03□□□□□ -2.08
HLA-DQA1P01909 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.03□□□□□ -2.08
HLA-DQA1P01909 TRAV28-201ENST00000557548 323 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 AL133153.1-201ENST00000557756 303 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.03□□□□□ -2.08
HLA-DQA1P01909 RPL23AP84-201ENST00000571193 464 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.03□□□□□ -2.08
HLA-DQA1P01909 MIR4999-201ENST00000585029 91 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 AC008739.2-201ENST00000597006 317 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 AC006539.2-201ENST00000601729 572 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.03□□□□□ -2.08
HLA-DQA1P01909 AC096577.2-201ENST00000611455 153 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 AL137847.3-201ENST00000611521 109 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.03□□□□□ -2.08
HLA-DQA1P01909 AC011890.2-201ENST00000613393 294 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 SDR42E1P2-201ENST00000614861 481 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.03□□□□□ -2.08
HLA-DQA1P01909 CCT4P2-201ENST00000233836 1548 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HLA-DQA1P01909 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
HLA-DQA1P01909 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.02□□□□□ -2.09
HLA-DQA1P01909 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 RNA5SP393-201ENST00000363423 117 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 SNORA72.3-201ENST00000365074 132 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 SNORA80E-201ENST00000384744 137 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DQA1P01909 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DQA1P01909 AL022400.1-201ENST00000423946 935 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.02□□□□□ -2.09
HLA-DQA1P01909 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.02□□□□□ -2.09
HLA-DQA1P01909 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.02□□□□□ -2.09
HLA-DQA1P01909 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.02□□□□□ -2.09
HLA-DQA1P01909 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DQA1P01909 AL049734.2-201ENST00000441066 616 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 MTCO3P45-201ENST00000443036 613 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 WASF1P1-201ENST00000447560 1131 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.02□□□□□ -2.09
HLA-DQA1P01909 AP1S2P1-201ENST00000457344 379 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DQA1P01909 SNORD11.1-201ENST00000459482 85 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 RPL27AP5-201ENST00000469428 449 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 AC010631.1-201ENST00000474150 156 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 AC055855.1-201ENST00000489563 579 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 AC106872.3-201ENST00000495104 446 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DQA1P01909 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.02□□□□□ -2.09
HLA-DQA1P01909 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.02□□□□□ -2.09
HLA-DQA1P01909 RNU6-390P-201ENST00000516259 103 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 AC087276.1-201ENST00000529659 480 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.02□□□□□ -2.09
HLA-DQA1P01909 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.02□□□□□ -2.09
HLA-DQA1P01909 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DQA1P01909 AC009097.3-201ENST00000563557 1018 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.02□□□□□ -2.09
HLA-DQA1P01909 AL354943.1-201ENST00000572103 781 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 AC136601.2-201ENST00000604356 474 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 AC025588.2-201ENST00000604851 466 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 AC012468.1-201ENST00000604888 430 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 AC007179.3-201ENST00000604976 235 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 AC073308.1-201ENST00000623696 305 ntBASIC2.02□□□□□ -2.09
HLA-DQA1P01909 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.02□□□□□ -2.09
HLA-DQA1P01909 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.02□□□□□ -2.09
HLA-DQA1P01909 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
HLA-DQA1P01909 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HLA-DQA1P01909 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HLA-DQA1P01909 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DQA1P01909 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DQA1P01909 AL391994.1-201ENST00000254724 282 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 FTLP6-201ENST00000355274 422 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 RNU6-223P-201ENST00000362830 107 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 RNA5SP374-201ENST00000362939 125 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 RNU4-28P-201ENST00000364739 141 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 RNU1-138P-201ENST00000384093 164 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 RNU6-217P-201ENST00000384164 104 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 RNA5SP210-201ENST00000391034 120 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms