Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
HLA-DQA2P01906 RNU6-552P-201ENST00000362869 119 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 RNU6-451P-201ENST00000362921 107 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 RNA5SP443-201ENST00000363083 132 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 RNY3P3-201ENST00000363816 102 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 RNU6-512P-201ENST00000364438 103 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 RNY3P14-201ENST00000384309 102 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 SNORA70C-201ENST00000384538 135 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 AC016397.1-201ENST00000412463 242 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 CYP4F29P-201ENST00000420685 446 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 HMGB1P27-201ENST00000431429 603 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 RPL36AP6-201ENST00000435770 321 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 SDAD1P2-201ENST00000441308 2028 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DQA2P01906 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DQA2P01906 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DQA2P01906 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DQA2P01906 RPL9P32-201ENST00000464118 620 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 RPS29P25-201ENST00000481709 171 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
HLA-DQA2P01906 EIF4EP3-201ENST00000498782 656 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DQA2P01906 SNORA31.3-201ENST00000516029 96 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 SCARNA15.2-201ENST00000516409 127 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 RN7SKP83-201ENST00000516512 178 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 RNA5SP468-201ENST00000516782 93 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 RN7SKP209-201ENST00000516888 304 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 ADI1P3-201ENST00000549509 470 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 CBX3P5-201ENST00000552017 521 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DQA2P01906 HSPE1P5-201ENST00000561489 272 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DQA2P01906 AC010525.2-201ENST00000590920 195 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DQA2P01906 AC013553.2-201ENST00000604244 589 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 AC006023.2-201ENST00000609916 167 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 AC012409.4-201ENST00000612923 249 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 MIR6830-201ENST00000636015 70 ntBASIC3.4□□□□□ -1.87
HLA-DQA2P01906 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DQA2P01906 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DQA2P01906 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 RIOK3P1-201ENST00000418778 1528 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 CASC19-280ENST00000642102 1351 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 UBE2L2-201ENST00000254302 429 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 Y_RNA.303-201ENST00000364998 94 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 SNORA56-201ENST00000383966 129 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 RNU6-190P-201ENST00000384154 102 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 RNU6-876P-201ENST00000391295 104 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 CISD1P1-201ENST00000393907 327 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 AL139039.1-201ENST00000401900 692 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 HSPE1P26-201ENST00000405341 275 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 AL354719.1-201ENST00000406535 843 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 U3.42-201ENST00000408746 214 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 RPS12P24-201ENST00000412619 387 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 AL109913.1-201ENST00000421173 514 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 UBE2D3P2-201ENST00000424409 445 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 RPL7P46-201ENST00000425129 740 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 AL451062.2-201ENST00000427515 271 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 AL591212.2-201ENST00000433923 257 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 PRDX3P3-201ENST00000447765 522 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 RN7SL93P-201ENST00000463035 293 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 RPL7P19-201ENST00000469948 618 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 MIR2114-201ENST00000516645 80 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 RNU6-677P-201ENST00000516914 101 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 YPEL5P3-201ENST00000547227 352 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 AL137849.1-201ENST00000604767 169 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 AC110741.2-201ENST00000605278 268 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 AL591034.3-201ENST00000605511 685 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 AC022893.3-201ENST00000607665 437 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 MIR6867-201ENST00000610636 67 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 DISC2.1-201ENST00000612827 205 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 AC048347.1-201ENST00000624621 427 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 MTND5P42-201ENST00000637720 498 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 OR52H1-202ENST00000641796 1061 ntBASIC3.39□□□□□ -1.87
HLA-DQA2P01906 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.39□□□□□ -1.87
HLA-DQA2P01906 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 224 ms