Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CLPTM1O96005 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.14□□□□□ -1.91
CLPTM1O96005 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.13□□□□□ -1.91
CLPTM1O96005 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CLPTM1O96005 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CLPTM1O96005 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.13□□□□□ -1.91
CLPTM1O96005 MAPK10-322ENST00000641485 4530 ntBASIC3.13□□□□□ -1.91
CLPTM1O96005 RNU6-629P-201ENST00000384061 103 ntBASIC3.13□□□□□ -1.91
CLPTM1O96005 MRPL42P2-201ENST00000403169 426 ntBASIC3.13□□□□□ -1.91
CLPTM1O96005 RPL5P18-201ENST00000406671 891 ntBASIC3.13□□□□□ -1.91
CLPTM1O96005 AC245054.2-201ENST00000415639 319 ntBASIC3.13□□□□□ -1.91
CLPTM1O96005 SYF2P2-201ENST00000417620 583 ntBASIC3.13□□□□□ -1.91
CLPTM1O96005 RPS15AP12-201ENST00000419498 388 ntBASIC3.13□□□□□ -1.91
CLPTM1O96005 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.13□□□□□ -1.91
CLPTM1O96005 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.13□□□□□ -1.91
CLPTM1O96005 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.13□□□□□ -1.91
CLPTM1O96005 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.13□□□□□ -1.91
CLPTM1O96005 AL451074.3-201ENST00000437709 472 ntBASIC3.13□□□□□ -1.91
CLPTM1O96005 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.13□□□□□ -1.91
CLPTM1O96005 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.13□□□□□ -1.91
CLPTM1O96005 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.13□□□□□ -1.91
CLPTM1O96005 AC010587.1-201ENST00000505809 469 ntBASIC3.13□□□□□ -1.91
CLPTM1O96005 AL117351.2-201ENST00000513571 157 ntBASIC3.13□□□□□ -1.91
CLPTM1O96005 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CLPTM1O96005 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.13□□□□□ -1.91
CLPTM1O96005 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.13□□□□□ -1.91
CLPTM1O96005 SETP2-201ENST00000553886 926 ntBASIC3.13□□□□□ -1.91
CLPTM1O96005 MIR4429-201ENST00000580105 73 ntBASIC3.13□□□□□ -1.91
CLPTM1O96005 MIR3146-201ENST00000580367 79 ntBASIC3.13□□□□□ -1.91
CLPTM1O96005 AP001029.3-201ENST00000588063 596 ntBASIC3.13□□□□□ -1.91
CLPTM1O96005 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.13□□□□□ -1.91
CLPTM1O96005 AP001429.1-201ENST00000602568 530 ntBASIC3.13□□□□□ -1.91
CLPTM1O96005 AL158211.4-201ENST00000606988 584 ntBASIC3.13□□□□□ -1.91
CLPTM1O96005 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.13□□□□□ -1.91
CLPTM1O96005 LRRC77P-213ENST00000637727 880 ntBASIC3.13□□□□□ -1.91
CLPTM1O96005 OR5H6-203ENST00000642105 978 ntBASIC3.13□□□□□ -1.91
CLPTM1O96005 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.13□□□□□ -1.91
CLPTM1O96005 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLPTM1O96005 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLPTM1O96005 AC032011.1-201ENST00000611703 1549 ntBASIC3.13□□□□□ -1.91
CLPTM1O96005 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CLPTM1O96005 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CLPTM1O96005 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLPTM1O96005 Y_RNA.6-201ENST00000362350 114 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 RNU6-1155P-201ENST00000363554 107 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 RNU4-1-201ENST00000363925 141 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 Y_RNA.296-201ENST00000364930 108 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLPTM1O96005 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.12□□□□□ -1.91
CLPTM1O96005 MIR135A2-201ENST00000384854 100 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 RPL23AP32-201ENST00000395315 459 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 AC127391.1-201ENST00000411737 98 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 OR1AA1P-201ENST00000419597 916 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.12□□□□□ -1.91
CLPTM1O96005 AL137014.1-201ENST00000420490 1226 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLPTM1O96005 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.12□□□□□ -1.91
CLPTM1O96005 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.12□□□□□ -1.91
CLPTM1O96005 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.12□□□□□ -1.91
CLPTM1O96005 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.12□□□□□ -1.91
CLPTM1O96005 SNRPEP4-201ENST00000435815 279 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 TIMM9P1-201ENST00000436122 256 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.12□□□□□ -1.91
CLPTM1O96005 USP9YP15-201ENST00000442391 422 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 MTND1P1-201ENST00000445453 368 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.12□□□□□ -1.91
CLPTM1O96005 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.12□□□□□ -1.91
CLPTM1O96005 Z99127.3-201ENST00000448158 395 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 AC115115.1-201ENST00000449927 248 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 AC234775.1-201ENST00000454247 670 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.12□□□□□ -1.91
CLPTM1O96005 RPL23AP41-201ENST00000484754 458 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 AP002812.1-201ENST00000495378 474 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.12□□□□□ -1.91
CLPTM1O96005 RN7SKP18-201ENST00000516005 275 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 RNU6-1095P-201ENST00000516148 108 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.12□□□□□ -1.91
CLPTM1O96005 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.12□□□□□ -1.91
CLPTM1O96005 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.12□□□□□ -1.91
CLPTM1O96005 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.12□□□□□ -1.91
CLPTM1O96005 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.12□□□□□ -1.91
CLPTM1O96005 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.12□□□□□ -1.91
CLPTM1O96005 AL391840.1-201ENST00000571144 367 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.12□□□□□ -1.91
CLPTM1O96005 NRBF2P1-201ENST00000587407 859 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.12□□□□□ -1.91
CLPTM1O96005 AC126118.1-201ENST00000607744 628 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 AF250324.2-201ENST00000608299 610 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.12□□□□□ -1.91
CLPTM1O96005 AL133173.2-201ENST00000614270 90 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 AL110115.1-201ENST00000614396 364 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 AC136475.10-201ENST00000620253 385 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.12□□□□□ -1.91
CLPTM1O96005 AC090617.7-201ENST00000623952 126 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.12□□□□□ -1.91
CLPTM1O96005 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLPTM1O96005 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
CLPTM1O96005 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLPTM1O96005 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms