Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 MTND1P5-201ENST00000517906 940 ntBASIC3.01□□□□□ -1.93
CLDN1O95832 AC093331.1-201ENST00000521474 169 ntBASIC3.01□□□□□ -1.93
CLDN1O95832 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN1O95832 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.01□□□□□ -1.93
CLDN1O95832 OR4T1P-201ENST00000554933 911 ntBASIC3.01□□□□□ -1.93
CLDN1O95832 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.01□□□□□ -1.93
CLDN1O95832 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN1O95832 DUXAP4-201ENST00000603046 613 ntBASIC3.01□□□□□ -1.93
CLDN1O95832 AL031176.1-201ENST00000604554 466 ntBASIC3.01□□□□□ -1.93
CLDN1O95832 BNIP3P10-201ENST00000605360 577 ntBASIC3.01□□□□□ -1.93
CLDN1O95832 uc_338.12-201ENST00000616344 181 ntBASIC3.01□□□□□ -1.93
CLDN1O95832 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.01□□□□□ -1.93
CLDN1O95832 AC099654.12-201ENST00000639868 649 ntBASIC3.01□□□□□ -1.93
CLDN1O95832 RIOK3P1-201ENST00000418778 1528 ntBASIC3.01□□□□□ -1.93
CLDN1O95832 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CLDN1O95832 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN1O95832 AL356274.2-201ENST00000624379 3752 ntBASIC3□□□□□ -1.93
CLDN1O95832 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLDN1O95832 RNU5A-8P-201ENST00000364102 114 ntBASIC3□□□□□ -1.93
CLDN1O95832 SNORA7.2-201ENST00000364446 145 ntBASIC3□□□□□ -1.93
CLDN1O95832 RNU6-1078P-201ENST00000364522 103 ntBASIC3□□□□□ -1.93
CLDN1O95832 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLDN1O95832 RNU6-1215P-201ENST00000384441 102 ntBASIC3□□□□□ -1.93
CLDN1O95832 Y_RNA.516-201ENST00000384541 124 ntBASIC3□□□□□ -1.93
CLDN1O95832 MIR135A2-201ENST00000384854 100 ntBASIC3□□□□□ -1.93
CLDN1O95832 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3□□□□□ -1.93
CLDN1O95832 RPL23AP32-201ENST00000395315 459 ntBASIC3□□□□□ -1.93
CLDN1O95832 AL136116.1-201ENST00000403591 381 ntBASIC3□□□□□ -1.93
CLDN1O95832 CCNG1P1-201ENST00000406783 885 ntBASIC3□□□□□ -1.93
CLDN1O95832 RN7SKP285-201ENST00000410137 318 ntBASIC3□□□□□ -1.93
CLDN1O95832 RN7SKP53-201ENST00000411337 315 ntBASIC3□□□□□ -1.93
CLDN1O95832 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3□□□□□ -1.93
CLDN1O95832 AC017079.2-201ENST00000416102 485 ntBASIC3□□□□□ -1.93
CLDN1O95832 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3□□□□□ -1.93
CLDN1O95832 AL139413.1-201ENST00000421309 217 ntBASIC3□□□□□ -1.93
CLDN1O95832 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3□□□□□ -1.93
CLDN1O95832 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3□□□□□ -1.93
CLDN1O95832 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3□□□□□ -1.93
CLDN1O95832 AC079448.1-201ENST00000449377 373 ntBASIC3□□□□□ -1.93
CLDN1O95832 AC140076.1-201ENST00000449897 361 ntBASIC3□□□□□ -1.93
CLDN1O95832 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3□□□□□ -1.93
CLDN1O95832 MTCO2P29-201ENST00000465212 189 ntBASIC3□□□□□ -1.93
CLDN1O95832 RPL23AP55-201ENST00000498163 452 ntBASIC3□□□□□ -1.93
CLDN1O95832 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
CLDN1O95832 ARL2BPP6-201ENST00000512757 439 ntBASIC3□□□□□ -1.93
CLDN1O95832 AC026801.2-201ENST00000515352 425 ntBASIC3□□□□□ -1.93
CLDN1O95832 RN7SKP244-201ENST00000516513 307 ntBASIC3□□□□□ -1.93
CLDN1O95832 RN7SKP60-201ENST00000516985 239 ntBASIC3□□□□□ -1.93
CLDN1O95832 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3□□□□□ -1.93
CLDN1O95832 AP003072.2-201ENST00000527756 676 ntBASIC3□□□□□ -1.93
CLDN1O95832 AP000907.2-201ENST00000530827 353 ntBASIC3□□□□□ -1.93
CLDN1O95832 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3□□□□□ -1.93
CLDN1O95832 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3□□□□□ -1.93
CLDN1O95832 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3□□□□□ -1.93
CLDN1O95832 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3□□□□□ -1.93
CLDN1O95832 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3□□□□□ -1.93
CLDN1O95832 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3□□□□□ -1.93
CLDN1O95832 MIR3146-201ENST00000580367 79 ntBASIC3□□□□□ -1.93
CLDN1O95832 MIR4425-201ENST00000580572 84 ntBASIC3□□□□□ -1.93
CLDN1O95832 AC068790.3-201ENST00000602988 553 ntBASIC3□□□□□ -1.93
CLDN1O95832 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3□□□□□ -1.93
CLDN1O95832 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3□□□□□ -1.93
CLDN1O95832 AC009268.2-201ENST00000621925 457 ntBASIC3□□□□□ -1.93
CLDN1O95832 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3□□□□□ -1.93
CLDN1O95832 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLDN1O95832 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3□□□□□ -1.93
CLDN1O95832 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CLDN1O95832 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLDN1O95832 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
CLDN1O95832 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN1O95832 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN1O95832 AC091152.2-201ENST00000591628 2569 ntBASIC2.99□□□□□ -1.93
CLDN1O95832 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN1O95832 RN7SKP226-201ENST00000364912 300 ntBASIC2.99□□□□□ -1.93
CLDN1O95832 RNU6-629P-201ENST00000384061 103 ntBASIC2.99□□□□□ -1.93
CLDN1O95832 RNU5A-6P-201ENST00000384136 116 ntBASIC2.99□□□□□ -1.93
CLDN1O95832 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN1O95832 MTHFD2P2-201ENST00000407725 247 ntBASIC2.99□□□□□ -1.93
CLDN1O95832 RN7SKP111-201ENST00000410349 271 ntBASIC2.99□□□□□ -1.93
CLDN1O95832 HMGN1P24-201ENST00000412282 298 ntBASIC2.99□□□□□ -1.93
CLDN1O95832 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN1O95832 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.99□□□□□ -1.93
CLDN1O95832 CCDC58P2-201ENST00000417131 366 ntBASIC2.99□□□□□ -1.93
CLDN1O95832 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN1O95832 RPL35AP12-201ENST00000425362 338 ntBASIC2.99□□□□□ -1.93
CLDN1O95832 MTCO3P30-201ENST00000426425 670 ntBASIC2.99□□□□□ -1.93
CLDN1O95832 AC104651.1-201ENST00000427559 735 ntBASIC2.99□□□□□ -1.93
CLDN1O95832 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN1O95832 MTND3P21-201ENST00000433774 331 ntBASIC2.99□□□□□ -1.93
CLDN1O95832 TIMM9P1-201ENST00000436122 256 ntBASIC2.99□□□□□ -1.93
CLDN1O95832 AL662791.1-201ENST00000441992 928 ntBASIC2.99□□□□□ -1.93
CLDN1O95832 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN1O95832 RAC1P7-201ENST00000445367 377 ntBASIC2.99□□□□□ -1.93
CLDN1O95832 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.99□□□□□ -1.93
CLDN1O95832 RPL9P33-201ENST00000484311 566 ntBASIC2.99□□□□□ -1.93
CLDN1O95832 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN1O95832 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN1O95832 AC108078.1-201ENST00000508073 725 ntBASIC2.99□□□□□ -1.93
CLDN1O95832 AP004371.1-201ENST00000525240 214 ntBASIC2.99□□□□□ -1.93
CLDN1O95832 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms