Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RAPGEF3O95398 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RAPGEF3O95398 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RAPGEF3O95398 AL359693.1-201ENST00000614959 2407 ntBASIC4.96□□□□□ -1.61
RAPGEF3O95398 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.96□□□□□ -1.62
RAPGEF3O95398 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RAPGEF3O95398 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RAPGEF3O95398 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.96□□□□□ -1.62
RAPGEF3O95398 RNU6-1120P-201ENST00000362988 108 ntBASIC4.96□□□□□ -1.62
RAPGEF3O95398 RNU6-1322P-201ENST00000364309 107 ntBASIC4.96□□□□□ -1.62
RAPGEF3O95398 RNU6-867P-201ENST00000364956 107 ntBASIC4.96□□□□□ -1.62
RAPGEF3O95398 RNY3P13-201ENST00000365542 102 ntBASIC4.96□□□□□ -1.62
RAPGEF3O95398 RNU1-39P-201ENST00000383897 165 ntBASIC4.96□□□□□ -1.62
RAPGEF3O95398 Y_RNA.409-201ENST00000383990 98 ntBASIC4.96□□□□□ -1.62
RAPGEF3O95398 RNU6-456P-201ENST00000384493 107 ntBASIC4.96□□□□□ -1.62
RAPGEF3O95398 RNU6-780P-201ENST00000391030 104 ntBASIC4.96□□□□□ -1.62
RAPGEF3O95398 RNU2-47P-201ENST00000410649 186 ntBASIC4.96□□□□□ -1.62
RAPGEF3O95398 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RAPGEF3O95398 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.96□□□□□ -1.62
RAPGEF3O95398 MTCO1P20-201ENST00000425366 358 ntBASIC4.96□□□□□ -1.62
RAPGEF3O95398 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.96□□□□□ -1.62
RAPGEF3O95398 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.96□□□□□ -1.62
RAPGEF3O95398 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.96□□□□□ -1.62
RAPGEF3O95398 TPT1P14-201ENST00000448018 505 ntBASIC4.96□□□□□ -1.62
RAPGEF3O95398 RPS29P26-201ENST00000477483 171 ntBASIC4.96□□□□□ -1.62
RAPGEF3O95398 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.96□□□□□ -1.62
RAPGEF3O95398 AC021146.1-201ENST00000511202 716 ntBASIC4.96□□□□□ -1.62
RAPGEF3O95398 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.96□□□□□ -1.62
RAPGEF3O95398 RN7SKP132-201ENST00000516001 208 ntBASIC4.96□□□□□ -1.62
RAPGEF3O95398 RNU4-60P-201ENST00000517239 135 ntBASIC4.96□□□□□ -1.62
RAPGEF3O95398 AC090572.1-201ENST00000519251 160 ntBASIC4.96□□□□□ -1.62
RAPGEF3O95398 HMGN1P28-201ENST00000521340 364 ntBASIC4.96□□□□□ -1.62
RAPGEF3O95398 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.96□□□□□ -1.62
RAPGEF3O95398 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.96□□□□□ -1.62
RAPGEF3O95398 OR4T1P-201ENST00000554933 911 ntBASIC4.96□□□□□ -1.62
RAPGEF3O95398 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.96□□□□□ -1.62
RAPGEF3O95398 KLKP1-201ENST00000595979 403 ntBASIC4.96□□□□□ -1.62
RAPGEF3O95398 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.96□□□□□ -1.62
RAPGEF3O95398 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.96□□□□□ -1.62
RAPGEF3O95398 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
RAPGEF3O95398 MTCO1P9-201ENST00000505577 1534 ntBASIC4.96□□□□□ -1.62
RAPGEF3O95398 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RAPGEF3O95398 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RAPGEF3O95398 AC244517.1-201ENST00000606030 2086 ntBASIC4.95□□□□□ -1.62
RAPGEF3O95398 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
RAPGEF3O95398 RNU1-70P-201ENST00000362618 164 ntBASIC4.95□□□□□ -1.62
RAPGEF3O95398 MIR708-201ENST00000390708 88 ntBASIC4.95□□□□□ -1.62
RAPGEF3O95398 CCDC58P2-201ENST00000417131 366 ntBASIC4.95□□□□□ -1.62
RAPGEF3O95398 AC004552.1-201ENST00000419089 348 ntBASIC4.95□□□□□ -1.62
RAPGEF3O95398 AC007283.2-201ENST00000424739 197 ntBASIC4.95□□□□□ -1.62
RAPGEF3O95398 AL121890.1-201ENST00000435457 205 ntBASIC4.95□□□□□ -1.62
RAPGEF3O95398 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.95□□□□□ -1.62
RAPGEF3O95398 NFU1P2-201ENST00000448700 469 ntBASIC4.95□□□□□ -1.62
RAPGEF3O95398 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RAPGEF3O95398 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.95□□□□□ -1.62
RAPGEF3O95398 AC074344.1-201ENST00000512823 224 ntBASIC4.95□□□□□ -1.62
RAPGEF3O95398 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.95□□□□□ -1.62
RAPGEF3O95398 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.95□□□□□ -1.62
RAPGEF3O95398 AC009812.2-201ENST00000517657 457 ntBASIC4.95□□□□□ -1.62
RAPGEF3O95398 AP006245.1-201ENST00000522549 120 ntBASIC4.95□□□□□ -1.62
RAPGEF3O95398 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.95□□□□□ -1.62
RAPGEF3O95398 AL158196.1-201ENST00000616786 434 ntBASIC4.95□□□□□ -1.62
RAPGEF3O95398 AC019226.1-201ENST00000625666 515 ntBASIC4.95□□□□□ -1.62
RAPGEF3O95398 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.95□□□□□ -1.62
RAPGEF3O95398 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RAPGEF3O95398 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
RAPGEF3O95398 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RAPGEF3O95398 MTND5P3-201ENST00000438536 1800 ntBASIC4.95□□□□□ -1.62
RAPGEF3O95398 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RAPGEF3O95398 RIOK3P1-201ENST00000418778 1528 ntBASIC4.94□□□□□ -1.62
RAPGEF3O95398 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
RAPGEF3O95398 OR1S2-201ENST00000302592 978 ntBASIC4.94□□□□□ -1.62
RAPGEF3O95398 RNU6-263P-201ENST00000363811 107 ntBASIC4.94□□□□□ -1.62
RAPGEF3O95398 SNORA7.4-201ENST00000384249 137 ntBASIC4.94□□□□□ -1.62
RAPGEF3O95398 RNU6-754P-201ENST00000391166 107 ntBASIC4.94□□□□□ -1.62
RAPGEF3O95398 RPS4XP8-201ENST00000402039 771 ntBASIC4.94□□□□□ -1.62
RAPGEF3O95398 AC092447.6-201ENST00000414578 210 ntBASIC4.94□□□□□ -1.62
RAPGEF3O95398 AL139132.1-201ENST00000431587 344 ntBASIC4.94□□□□□ -1.62
RAPGEF3O95398 NEK4P1-201ENST00000433383 879 ntBASIC4.94□□□□□ -1.62
RAPGEF3O95398 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.94□□□□□ -1.62
RAPGEF3O95398 NDUFS5P3-201ENST00000450668 321 ntBASIC4.94□□□□□ -1.62
RAPGEF3O95398 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.94□□□□□ -1.62
RAPGEF3O95398 SNORD108-201ENST00000459332 71 ntBASIC4.94□□□□□ -1.62
RAPGEF3O95398 RNU6-798P-201ENST00000516912 103 ntBASIC4.94□□□□□ -1.62
RAPGEF3O95398 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.94□□□□□ -1.62
RAPGEF3O95398 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.94□□□□□ -1.62
RAPGEF3O95398 AC026333.2-201ENST00000542164 106 ntBASIC4.94□□□□□ -1.62
RAPGEF3O95398 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.94□□□□□ -1.62
RAPGEF3O95398 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.94□□□□□ -1.62
RAPGEF3O95398 AL133153.1-201ENST00000557756 303 ntBASIC4.94□□□□□ -1.62
RAPGEF3O95398 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.94□□□□□ -1.62
RAPGEF3O95398 MIR2682-201ENST00000580305 110 ntBASIC4.94□□□□□ -1.62
RAPGEF3O95398 AC105224.1-201ENST00000587055 421 ntBASIC4.94□□□□□ -1.62
RAPGEF3O95398 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.94□□□□□ -1.62
RAPGEF3O95398 AC008536.2-201ENST00000607284 349 ntBASIC4.94□□□□□ -1.62
RAPGEF3O95398 TUG1_1.1-201ENST00000610654 145 ntBASIC4.94□□□□□ -1.62
RAPGEF3O95398 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.94□□□□□ -1.62
RAPGEF3O95398 IGHVIII-44-202ENST00000636235 289 ntBASIC4.94□□□□□ -1.62
RAPGEF3O95398 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
RAPGEF3O95398 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms